Candidatus Thioglobus sp. NP1: CRN91_06755
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Entry
CRN91_06755 CDS
T05818
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
thin
Candidatus Thioglobus sp. NP1
Pathway
thin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRN91_06755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thin03019
]
CRN91_06755
03009 Ribosome biogenesis [BR:
thin03009
]
CRN91_06755
Enzymes [BR:
thin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CRN91_06755
Messenger RNA biogenesis [BR:
thin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CRN91_06755
Ribosome biogenesis [BR:
thin03009
]
Prokaryotic type
rRNA processing factors
CRN91_06755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Cornifin
S1
Motif
Other DBs
NCBI-ProteinID:
AXE62353
LinkDB
All DBs
Position
1317113..1319323
Genome browser
AA seq
736 aa
AA seq
DB search
MNHILINAIHKEEIRVAIVRSQKLTDLNIETSLNRKTKGNIYKAKISRVEQSLEAAFVDY
GKDKHGFLPFKEISPFFSDGVKPKGEKLAISDVLKEGQEIIIQVEKEERGNKGAALSTYI
NLAGAYMILTPNNPKSSGISRQINATERQDLKNLLPKLTVPKHSGLIIRTEGAGRGVTEL
QWEVDHLTQLWKSIKTATKSQDGPFLIYQESDITVRALRDYLREDTDSVIIDDLETYQKA
RDFISFVMPHYLDKIKFFDVTEHSLFAHMGVESQVKSVFDREVSLKSGATIVFDATEALT
AIDINSARATRGTSIEDTAHKANLDAAEEIALQLQLRDIGGLVVIDFIDMASESNRKSIE
KLMEKATANDRARVQIGTISRFGLLELSRQRLMNSVAESTGKTCSVCNGSGTNPTIPSLS
LRIIRQLEDSLNSSKNGGDVTIQSSVEVITYLLNEKRQNIIEMEQKNDLKITLLPNQYMH
FPHFTINKQKGDKRSHHKSFQGVSKPQENPNEINYIDKPDLPAISVNHPTTKMPEKKVSF
MTKLSDIFSSEKKSSTPARNTRPQNRNQNQNRNRNQNRNRNRNQNRNQAAQENTNISDNS
KNTNNQNRNKNLKSNPNSQHKKNVSNITNANENVVTKTPENVVTKTPENVVTKTPENVVT
KTPENVVTKTPENVVTKTPENVVTKTPENVVTKTPENVVTKTPENVIPKPAKKTARKPAK
KAVNKNLEKTTKKLDE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacattctcataaatgctatccacaaggaagagatccgggtggcaatcgtcagg
agccaaaagcttactgatcttaatatagaaacaagcctaaatagaaagactaaaggcaat
atttataaagcaaagatttctcgtgttgagcaatcccttgaagcggcttttgtcgattat
ggtaaggataagcatggttttttgcctttcaaggagatctctccatttttttcagatggt
gtaaaaccaaagggagagaagctagcaattagtgatgtccttaaagaagggcaggaaata
attattcaagttgaaaaggaagaacggggcaataaaggagccgcattaagtacttatata
aatttagctggagcttacatgattcttacgccaaataatcctaaaagttcaggtatttca
agacaaattaatgctactgaacgtcaagacttaaaaaatcttctaccaaaacttacagtg
ccaaaacattctggattgattatccgtacagaaggtgctggaagaggtgttactgaattg
caatgggaagttgatcatttaactcaattatggaaatcaattaagactgccaccaagagc
caggatggtcccttcctaatttatcaagagagtgatattacagttagagcacttcgtgat
tatcttagagaggataccgatagtgttattatcgatgatttagaaacttatcaaaaagca
agagactttataagctttgtaatgcctcactatctagataagattaaattctttgatgtt
actgaacactctctttttgctcatatgggtgttgaatctcaagttaaaagtgtttttgat
cgagaagtctcattgaagtctggtgcaacaattgtttttgatgctacagaggcattaact
gccattgatattaactctgcacgggcaacaagaggaacaagcattgaggatacagctcat
aaagcaaaccttgatgcggcagaagaaattgcattacaacttcagttaagagatatcggt
ggtctagtggttattgattttattgatatggcatcagaatcaaatagaaaatcaattgaa
aagttaatggaaaaagctactgctaatgatagagctcgagttcaaataggaacaatatca
agatttggtttattggaactatccagacaacgcttaatgaactcggtagcagaatcaact
ggaaaaacttgttcagtttgtaatggaagtggaacaaatccaaccatcccttctttatca
ttaagaatcattcgtcagcttgaagattctcttaattcctcaaaaaatggaggcgacgtt
acaatacaatcaagtgttgaggttattacctatcttcttaatgaaaaaagacaaaatata
attgaaatggagcaaaagaatgaccttaagataactcttctcccaaatcaatatatgcat
tttcctcatttcactataaataaacaaaaaggtgacaagagatcccatcataagagcttc
cagggtgtatcgaaaccacaagaaaatcctaatgaaattaactatattgataaaccagac
cttccggcaatttcagtaaatcaccctactactaaaatgccagaaaagaaagtttcattt
atgactaaattatctgatattttttcttctgaaaagaaatcatcgacacctgctaggaat
actaggcctcaaaataggaaccagaatcagaatcgtaaccgtaatcagaatcggaatcgt
aaccgtaatcagaatcggaatcaagctgctcaagaaaacacaaatattagtgataattca
aaaaatactaacaatcaaaataggaataagaatctaaaaagtaatcctaattctcaacat
aaaaaaaatgtatctaatataactaatgctaatgagaatgttgtgactaaaactcctgag
aatgttgtgactaagactcctgagaatgttgtgactaagactcctgagaatgttgtgact
aagactcctgagaatgttgtgactaaaactcctgagaatgttgtgactaagactcctgag
aatgttgtgactaagactcctgagaatgttgtgactaagactcctgagaatgttgtgact
aagactcctgagaatgttattccaaagccagctaagaaaactgcacgtaaaccagcaaaa
aaagctgttaataaaaacttagaaaaaactactaaaaaattggatgaataa
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