Candidatus Thioglobus sp. NP1: CRN91_06840
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Entry
CRN91_06840 CDS
T05818
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
thin
Candidatus Thioglobus sp. NP1
Pathway
thin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CRN91_06840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thin03400
]
CRN91_06840
DNA repair and recombination proteins [BR:
thin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRN91_06840
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CRN91_06840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
ATPase
AAA_19
ATPase_2
DUF8810
P-loop_SecA
Kinesin
BrxC_BrxD
DUF1816
AAA_16
Orbi_NS3
Motif
Other DBs
NCBI-ProteinID:
AXE62368
LinkDB
All DBs
Position
complement(1332371..1334356)
Genome browser
AA seq
661 aa
AA seq
DB search
MARKFQLKSNFSPKGDQPKAIKKLLDGIHSGEKFQTLIGVTGSGKTFTLANVIEQSQRPS
LIMAPNKTLAAQLYSEMKEFFPDNAVEYFVSYYDYYQPEAYVPASDTFIEKDASINEQIE
QMRLSATKSLLERKDVIIVASVSAIYGLGDPESYMKMLLHLTVGEITNQREILATLSKMQ
YSRNDVTLIRGHFRVKGEVIDIFPADSEERAVRIEMFDDEIENLYWFDPLTGEKLKALQR
ITIYPKTHYVTPKSTIINILDDIKVELGIRKKELLSQNKLVEDQRLSQRVAQDMEMMREL
GYCSGIENYSRYLSGRKPGEPPPTLFDYMPEDALIILDESHVTVSQIGGMYNGDRARKTT
LVDFGFRLPSALDNRPLRFEEFSERLNQCILVSATPANFELEVSTVIAEQVVRPTGLLDP
GIDIRPVETQVDNLLSEIHKRVKVKERVLVTTLTKKMSEQLSDYLNDHNVKVRYLHSDID
TVERVEIIRDLRLGIFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLVQTMGR
AARHINGSVILYADRITNSMQRAMDVTSRRRTKQEAYNKKYGITPMGVVKPIVDILDTDI
SASDLSELDSETIQIRLSPVQLSKELKRLEKEMYKFAEDLEFEQAADMRNQIKRLRDSQF
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaaatttcaactcaaatcaaatttttcaccaaagggtgatcagcctaaggca
attaaaaaacttctcgatggtatacattctggtgagaagtttcaaacgcttattggggta
actggttctggcaaaacatttaccctcgcaaatgttatagagcaaagccaaaggccaagc
ctaattatggctcctaataaaacattggctgcccaactttatagtgagatgaaggaattt
tttccagataatgcagttgagtattttgtttcttattatgattattatcaacccgaggca
tatgtccctgcttcagatacctttattgaaaaagatgcatcaataaatgagcagatcgaa
cagatgcgactatcagctactaaatctcttcttgagcgaaaagatgtaattatagttgct
agtgtttctgcaatttatggccttggtgatcctgaaagttacatgaaaatgttgcttcat
ttaacagttggtgagattacaaatcagagggaaatcctagcaaccttatcaaaaatgcaa
tattcaagaaatgatgtcacattaattagaggtcattttagagttaagggagaggttatt
gatatttttcctgctgattcagaggagagggcggttcgtatagagatgtttgatgatgag
attgagaatctttattggtttgatccattaactggtgaaaagctcaaggcacttcaaagg
ataactatatatccaaagactcattacgttactccaaagtcaactatcataaatattctt
gatgatattaaagttgaacttggtatcagaaaaaaagaacttttatctcagaataagctt
gttgaggatcaaagactctcgcaaagagttgcacaggatatggaaatgatgagagagctt
ggatattgctcaggtattgagaattactcacgttacctatcaggtcgtaagccaggagaa
ccaccaccaactctctttgactatatgccagaagatgccctaattattttagatgagtct
cacgtaacagtaagccagataggtggaatgtacaatggtgatagagctcgtaagactaca
ttagttgattttggttttcgtttaccatcagcgcttgacaatcgtccattaaggtttgaa
gaattttcagagcgtttaaatcaatgtattttggtttctgcaacccctgctaattttgaa
ttagaggtttctactgtaattgctgagcaagttgtaaggcccacaggacttcttgatcct
ggaatagatattcgtccagttgaaacccaggttgataatcttctatctgaaatccataag
agggtcaaagtaaaggagagagttctagttacaacacttaccaagaaaatgtcagagcag
ttaagtgactacttgaatgaccataatgtgaaagttcgttatcttcactcagatattgat
acagtcgaaagggttgaaattattcgtgatctgcgccttggaatttttgatgtcttggta
ggaattaatctacttagagagggcttggatatccctgaagtttcattagttgcaattctt
gatgccgataaagagggttttttaagatctgagcgatctttagttcaaactatgggaagg
gctgcaaggcacattaatggtagtgttattttgtacgcagatagaattacaaattcaatg
caaagagctatggatgttacctctagaagaagaactaagcaggaggcttataataaaaaa
tatggaataacgcctatgggagtggttaagccaattgttgatatattggatactgatatc
tctgcgtctgatctttcagaactagattcagagactattcagattcgactctctccagtc
cagctttcaaaagagctaaaacgtcttgaaaaagagatgtataaatttgcagaggattta
gagtttgagcaagcagcagatatgagaaatcaaataaagcgattaagggacagtcagttc
aaatag
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