Thiomicrospira sp. S5: AYJ59_01220
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Entry
AYJ59_01220 CDS
T05796
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
thio
Thiomicrospira sp. S5
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thio03400
]
AYJ59_01220
Enzymes [BR:
thio01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AYJ59_01220
DNA repair and recombination proteins [BR:
thio03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AYJ59_01220
Prokaryotic type
AYJ59_01220
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AZR81037
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Position
complement(269963..271414)
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AA seq
483 aa
AA seq
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MTTLVWLQRELRLQHHPALETALSTAAKNDDAVIVAYFHDPKHTVGDANSAWLADSLLDL
KQRLAAQGGALWLIEGDFAERFQTLLDTYSIKRVHYTFQLGEPFKTLQQTALTICKERNV
TLTPFETENWLPYETVRNQSGQPYKVFTPFYNALMQRIGDVEPFDETPLDFHTTARINCP
PEHDRLPQHLSALRHQPWAEKVLKHWRIGEAQAWQKVDDFVENRLSHYAHDRDFPALAAT
SELSPHLHFGELHSRAVLLSLSPLNPDTPTAAAGWIRQLAWREFARAILWHFPDTETTPF
QPKFQGFFTPLSEQDEAHQDFYQAWCRGETGVPMIDAGMKQLWETGWMHNRVRMLVASWL
TKNADIDWRAGEHWFRHTLVDADPANNVMGWQWVAGCGVDAAPYYRLFNPVRQSEKFDAD
GRYLRQWLPALKNWPSKRIHAPWISGAQPDLWSETPEPIVDLEASRQRHLEKVQALKQRR
LQD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacgacattggtttggctccaacgcgaattacggcttcagcatcatccggcgctggaa
accgctttaagcaccgccgccaaaaacgacgatgcggtgattgtcgcctattttcacgac
ccgaaacacaccgtcggagacgccaactcggcctggctggcggacagcttgctcgacctg
aaacaacgtctggccgcccaaggcggtgcgctgtggttaattgagggcgactttgccgag
cgctttcaaaccctgctcgacacttattcaatcaaacgggtgcattacacctttcaactg
ggcgaaccctttaaaaccctgcaacaaaccgcgctgaccatctgcaaagaacggaacgtc
accttaacgcccttcgagaccgaaaactggttaccttacgaaacggttcgcaaccaatcc
ggtcagccttacaaagtcttcacccccttttacaacgccctgatgcaacgcatcggtgac
gtcgagcctttcgacgaaacaccgttggacttccataccacagcacgcattaactgtccg
ccggaacacgaccgcctgccacaacatttgtcggcgcttcgccatcaaccctgggcggaa
aaggtgctcaaacactggcgcatcggcgaagcccaggcctggcaaaaagtggatgatttc
gttgaaaaccgtttgtcacattatgcccatgaccgcgatttcccggccttggccgccacc
agcgaactctccccgcacctgcatttcggcgaactccatagccgggcggttttactgagc
ttatcaccgctcaaccctgacacccccactgcggcggcgggctggattcgccagttggcg
tggcgcgaattcgctcgcgccatcctgtggcattttcccgacaccgaaaccacaccgttt
caacccaaattccaaggctttttcaccccgttatcggaacaggatgaagcacatcaagat
ttctaccaggcctggtgccgcggtgaaaccggcgtgcccatgattgacgccggcatgaaa
caactttgggaaaccggctggatgcacaaccgggtgcggatgctggtggcttcctggctc
accaaaaacgccgacatcgattggcgggccggcgaacactggtttcgccacacgttggtg
gatgccgacccggccaataatgtgatgggctggcaatgggtggccggttgcggcgtggat
gccgcgccctattaccggttgttcaacccggttcgtcaaagcgagaaattcgatgccgac
ggtcgctacctcagacagtggttaccggccttgaaaaattggcctagcaaacggatacac
gcgccctggatcagcggcgcacaacccgatctatggtcggagacacccgaacccatcgtg
gatctggaggccagccgtcaacgtcatctggaaaaggttcaggcgctgaaacaacggcgc
ctgcaagattga
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