Thiomicrospira sp. S5: AYJ59_01860
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Entry
AYJ59_01860 CDS
T05796
Name
(GenBank) fumarate reductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio00020
Citrate cycle (TCA cycle)
thio00190
Oxidative phosphorylation
thio00650
Butanoate metabolism
thio00720
Other carbon fixation pathways
thio01100
Metabolic pathways
thio01110
Biosynthesis of secondary metabolites
thio01120
Microbial metabolism in diverse environments
thio01200
Carbon metabolism
Module
thio_M00009
Citrate cycle (TCA cycle, Krebs cycle)
thio_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thio_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AYJ59_01860
00650 Butanoate metabolism
AYJ59_01860
09102 Energy metabolism
00190 Oxidative phosphorylation
AYJ59_01860
00720 Other carbon fixation pathways
AYJ59_01860
Enzymes [BR:
thio01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AYJ59_01860
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Gene cluster
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Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
Thi4
Lycopene_cycl
GIDA
NAD_binding_8
NAD_binding_7
N1221
Pyr_redox_3
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AZR81152
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Position
402779..404563
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AA seq
594 aa
AA seq
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MVSLQQVDTFHFDAVIVGAGGAGLRAALQLAKSDLRVAVVSKVFPTRSHTVAAQGGINAA
LGNLTEDNWHWHMYDTVKGSDYLGDQDAIEFMCREATEIVRELEHFGVPFSRTEQGKIYQ
RPFGGQSRNFGESQATRTCAAADRTGHAILQTLYQQNIQAGTTFFDEFFAVDLVKDEVGH
IGGMVVMNLQNGEYQLLRAHAVMVATGGACQLFKTNTNAKINTGDGLAMVLRAGLPLQDM
EFWQFHPTGVANKGMLLSEAARGEGGVLRNADGEAFMVRYAPHVKDLASRDVVSRAIAIE
VKEGRGCGPNKDHMLLDLTHLDSEMIKKRLPGIRDIGLTFLGLDMCDDPIPVYPTAHYMM
GGIPTNFHGQVQTLDESGQAISVPGLYAVGECACVSVHGANRLGGNSLLDIVVFGRAAAK
EIERVLNLQKSDRNFDRRLDLAPVEARLNKWEAPAHDRKESIAAIKHDLQVAMQEGCGVF
RNQESMQALIEALEPIQQRLDEAVLHDRSRAFNLERMEALELENLMTLAYATVHSAIERT
ESRGAHSRVDFTERDDENWLQHSLYFLDGHRLRYKPVCVTPLTVTGFEPKPRVY
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattgcagcaggtcgatacctttcattttgatgcggtgattgtcggagccggg
ggcgcggggcttcgggctgcgttgcaattggccaagtcggatttgcgcgtggcggtggtg
tcgaaagtgtttccgacgcgttcgcatacagtggcggcgcagggcggcattaatgcggcc
ttgggcaatctgaccgaggataactggcactggcatatgtacgacaccgtcaagggcagt
gattatctgggcgatcaggatgcgattgaattcatgtgccgggaagccactgaaattgtg
cgcgagttggagcatttcggcgtgccgttttcgcgcaccgagcaaggcaaaatttatcaa
cgaccgttcggcggccaaagccgaaacttcggcgaaagccaggccacgcgcacttgtgcg
gcggcggaccgcaccggacatgccattttgcaaaccctgtatcagcagaacattcaggcg
ggcacgacctttttcgatgaattttttgcggtggatttggtcaaggatgaagttggtcat
atcggtggcatggtggtgatgaacctgcaaaacggtgaataccaattattgcgcgctcat
gcggtgatggtggccaccggcggggcttgccagttgtttaaaaccaacaccaacgccaaa
atcaacaccggcgacggcttggcgatggtgctgcgcgcgggcttgccgttgcaggacatg
gagttctggcagttccacccgaccggcgtggcgaacaaaggcatgttgttgtcggaagcg
gcgcggggcgaaggcggcgtgttgcgcaatgccgacggcgaagcctttatggtgcgttat
gcgccgcatgtgaaggatttggcgtcgcgggatgtggtgtcacgcgccattgccattgag
gtgaaagaaggacgcggttgcggccccaataaagaccatatgttgctggatttgactcat
ctcgattcggagatgattaaaaagcgtttgccgggcattcgcgacatcggtttgacgttt
ttgggcttggatatgtgcgacgacccgattccggtgtatccgaccgcgcattatatgatg
ggcggcattccgaccaatttccacggtcaggtgcagacgctggatgaaagcggtcaggcc
atcagtgtgccgggcctgtatgcggtgggcgaatgcgcttgcgtgtcggtgcacggtgcg
aaccgcttgggcgggaactccttgttggacatcgtcgtgttcggacgggccgccgccaag
gaaatcgaacgggtgttgaacttgcagaaatcggaccgcaacttcgaccgccgattggat
ttggcgccggtggaagcgcgactgaacaaatgggaagcgccagcgcatgaccgcaaggag
tccattgccgccatcaaacacgatttacaagtcgccatgcaggagggttgcggggttttc
cgcaaccaggaatccatgcaggcgttgattgaagccttggagccgattcaacagcgtttg
gatgaagcggtgttgcacgaccgcagccgggcgttcaacttggaacgcatggaagcgctg
gagctggaaaacctgatgacgctggcgtatgcgaccgtgcattccgcgattgaacgaacg
gaaagtcgcggcgcgcattcccgcgtggactttaccgagcgtgacgacgaaaactggttg
cagcacagcctgtattttctggacggccatcgtctgcgttataagccggtgtgcgtcacg
ccgttgaccgtgaccggattcgaacccaagcctcgcgtgtactaa
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