Thiomicrospira sp. S5: AYJ59_02200
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Entry
AYJ59_02200 CDS
T05796
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYJ59_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thio03400
]
AYJ59_02200
Enzymes [BR:
thio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYJ59_02200
DNA repair and recombination proteins [BR:
thio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYJ59_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_11
AAA_19
RsdA_SigD_bd
HypA
Motif
Other DBs
NCBI-ProteinID:
AZR81210
LinkDB
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Position
482342..484708
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AA seq
788 aa
AA seq
DB search
MFVKVAVPGPFLAPLDYALQAVSSDAENGAHAETANLSLALEPNESSADAGDSETSTQKD
ILPVIGGRVTVPFRNKRHTGIVMALSEEAEVDAAKIKPIDTVLDAEPIFSEPEMALLQWA
SHYYHEPIGNVMQTALPKRIRQGESLTVEGVPAWQLTEIGQSAESQIASNATQQKALFKA
LSKALSTQTDAVTAEQLNAVLSGWRLPMKRFIEKGWVEEIEKSCLHALPPREKLARPGHI
LNTEQQAAVDQVLAQDGFSAHLLEGVTGSGKTEVYLGLIEAIIAQGKQVLVLVPEIGLTP
QTVKRFEAYLQAPVAVMHSGLNDKERHCAWSLVKTHQVSVLLGTRSAIFTPFDNLGLCIM
DEEHDLSFKQQDGFRYSARDCLVRRAQLEKVPVVLGSATPSLETLYNAESGRYHWLKLTR
RAGTASLPTIGLLDVRGVPQEEGVSEALKAQMHTHLQGGGQVLLFLNRRGYAPVLMCHDC
GWQAACPSCDANMTYHHQVGELRCHHCGHQEKAPSHCPNCGSGEFVKVGQGTERLEQAVA
AWFPDYRVLRVDRDTTRNKGQMMALTEQASQGEADILIGTQMLAKGHHFPKVTLVGLLDI
DQGLFSCDFRAAERMAQLVVQVSGRAGRAEQAGEVLIQTHHPEHPLLKVLVEQGYGAFAE
QALQGRRLAELPPFQYQILLRAESVDPQSGWTFLNDVKNRLNFAKMQLLRSHFSVAEPAD
EAPELEVFGPVSAPMLRRQGRFRYQLLLQSAQRGWLHTWLAQVESELYTSPQAKKVRWSL
DVDPQEMT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaaagtcgccgtgcccggaccgtttttggcgccgttggattatgcattgcaa
gccgtttcgagtgacgctgagaatggcgctcatgcggagaccgcgaacctgtcgctggcg
ctggaaccgaatgagtcttcggcggatgcaggagattccgaaacgtcaacacaaaaagat
attttgcctgtgatcggtggtcgggtcacggtgccgtttcgcaataagcgccacactggc
attgtcatggccttgagtgaagaagccgaagtcgacgccgccaaaatcaaacccatcgac
acggtgttggacgccgaaccgattttctccgagccggaaatggcgctgttgcagtgggcc
agccattattatcatgagcccatcggcaacgttatgcaaaccgccttaccgaaacggatt
cgccagggcgaatctttgacggtggaaggcgtgcccgcttggcagttgaccgaaatcggg
cagtctgccgaatcccaaattgcatccaatgccacgcaacaaaaggcgctgttcaaagcg
ctgtccaaagcgctgtccacccaaaccgacgccgtcaccgccgagcaattgaatgcggtg
ctcagcggttggcgtttgccgatgaagcgttttatcgaaaaaggctgggtcgaggaaatt
gaaaaaagttgtctgcacgccctgccgcccagggaaaaactggccaggcctggtcatatc
ttgaataccgaacaacaggccgcggtggaccaggtgttggcccaagacggtttcagcgcg
catcttttagaaggggtgaccggcagcggcaagaccgaggtgtatcttggcttgattgaa
gccatcatcgcgcaaggcaaacaagtgctggtactggtgccggaaatcggtctgacgccg
caaacggtcaaacgtttcgaagcctatttacaggcgccggtggcggtgatgcattccggt
ttgaacgataaggaacgtcattgcgcctggtcgctggtgaaaacccatcaggtatcggtg
ttgctgggaacgcgttcggcgatttttacgccgtttgacaatcttggcttgtgcattatg
gacgaagagcatgatttgtcattcaagcaacaggacggtttccgttattcggcgcgggat
tgtttggtgcgccgggcgcagttggaaaaagtgccggtggtgttggggtcggcgacgccg
tcgctggaaaccctctacaatgccgaaagtggccgctaccattggctgaaactgacccgc
cgcgccggcaccgcgtccttgccgacgatcggtttgctggacgtgcgcggtgtgccgcag
gaagaaggtgtgtccgaggccctgaaagcgcagatgcacacgcatttgcagggcggtggg
caggtgttgttgtttttgaaccgacgcggttatgcgccggtgttgatgtgtcatgactgt
ggttggcaagcggcctgcccgagttgcgatgccaatatgacttaccatcaccaagtgggc
gaactgcgctgtcatcactgcggacaccaggaaaaggcgccgtcgcattgcccgaattgc
ggttccggcgaatttgttaaagtcggccagggcacggaacgattggaacaggccgtggcg
gcttggttcccggattatcgcgtgttacgggttgatcgcgacaccacacgcaataaaggc
cagatgatggccttgaccgaacaggccagccagggcgaagcggatattttgatcggcacg
caaatgctggccaaaggccatcattttccgaaagtgaccttggtggggttgttggacatt
gaccaaggcttgttcagttgcgactttcgcgccgccgagcggatggcgcaactggtggtg
caggtgtcgggccgcgccgggcgggcagaacaggccggtgaagtgttgattcaaacccac
catccggaacacccattattgaaagtgttggtggagcaaggttatggcgcctttgcggaa
caggcgttgcaaggccgtcgtttggcggagttgccgccgtttcaatatcaaattctgttg
cgcgctgagtcggtggacccgcagtccggttggacctttttaaatgatgttaaaaaccgc
ctgaactttgctaaaatgcagttattacgttcgcatttctcggtagccgagccggcggac
gaggcgccggagcttgaggtgtttggcccggtcagtgcgccgatgttgcgccggcaaggc
cggttccgttatcagttgctgctgcaaagcgcgcaacgtggttggttgcacacttggttg
gcgcaggtggaaagtgaactttacacctcgccccaggcgaaaaaggtacgctggtccttg
gatgtcgatccacaggagatgacctga
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