Thiomicrospira sp. S5: AYJ59_02755
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Entry
AYJ59_02755 CDS
T05796
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
thio
Thiomicrospira sp. S5
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thio03009
]
AYJ59_02755
Enzymes [BR:
thio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AYJ59_02755
Ribosome biogenesis [BR:
thio03009
]
Prokaryotic type
rRNA helicases
AYJ59_02755
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_30
CMS1
AAA_19
DUF6506
Motif
Other DBs
NCBI-ProteinID:
AZR81301
UniProt:
A0A3S9TLV0
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All DBs
Position
complement(610545..611753)
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AA seq
402 aa
AA seq
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MTFEELDLDPALLSAIEEQHFHKPTPIQAEAIPEMLLCKDVLAGAATGTGKTAAFVLPAL
QFLLDTPKPSRHPRVLILAPTRELAFQIHKVVKQLGTHCPFESNIITGGFASDKQLNVLQ
SNMDILVATPGRLLNIMTKEFIDLSDVELLIIDEADRMLDMGQGPDVLALIEAIPGDFQA
ACFSATLGGSGLAKFAEEILDEPSVIQVNAPNQQSDQIQQFAYLANDKAHKQALLKAILN
DDTCQSAIVFCNKKDRAIELADWLQAEGVSSTVLHGDFIQAKRLEKTNKFKQGKIKVLVA
TDVAARGLDILNVTHVINYDVPFRGDTYIHRIGRTGRAQQVGIAINLVERHDLSNLQRIE
YHLKQRIPLAKIPGLEPNFKLKDTLKKPKKKKKKDTKAKKKR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaagaattagaccttgacccggcgttgctcagcgccatcgaagaacagcat
ttccacaaacccacgccgattcaggcggaagccatccccgaaatgctgttatgtaaagat
gtcctggccggagccgcgacgggtacggggaaaaccgccgcttttgtcttaccggcccta
caatttctgttggacacccccaaacccagccgacaccctcgcgtgttgattctggctcca
acacgtgaattggccttccaaattcacaaagtggttaaacaactcggtacgcattgccca
ttcgaatccaacatcattaccggagggtttgcttccgacaaacaattgaacgttttacag
tccaacatggacatactggtcgccacgccgggccgtctgctcaacatcatgaccaaggaa
ttcatcgatttgtccgatgtggagctgctcatcattgatgaagccgatcgcatgctcgat
atgggacaaggaccggatgtgctggccttgattgaagccattcccggcgattttcaagcc
gcctgcttttccgccaccctcggcgggtcaggcctggcgaaattcgccgaagagattttg
gatgaacccagcgtcattcaagtgaatgcgccgaaccaacaatccgaccaaatccagcaa
ttcgcctatctcgcgaatgataaggcacataagcaagccttactgaaagcgattctaaac
gacgacacctgccagagcgcgattgtcttctgcaacaaaaaagaccgcgctatcgaactg
gcggattggttacaggccgaaggcgtgtccagcaccgttctgcatggcgactttatccag
gccaaacgactggaaaagaccaataaattcaaacaaggcaaaatcaaggtgctggtcgcc
accgatgtcgccgctcgcggcttggacattctcaatgtcacccacgtcatcaactacgac
gtgcctttccgtggagacacttatatccaccgcatcggtcgaaccggccgcgcacaacaa
gtcggcatcgccatcaatctggtggaacgccatgacctatccaacctgcaacgcatcgaa
tatcatctcaaacagcgcattccgctggccaaaatcccggggttggagcccaacttcaag
ctcaaagacaccctgaaaaaaccgaagaagaaaaagaaaaaagacaccaaagcgaagaaa
aaacgctaa
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