Thiomicrospira sp. S5: AYJ59_03845
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Entry
AYJ59_03845 CDS
T05796
Name
(GenBank) aminomethyltransferase
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio00260
Glycine, serine and threonine metabolism
thio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AYJ59_03845
Enzymes [BR:
thio01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
AYJ59_03845
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
AYJ59_03845
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
Pyr_redox_3
GIDA
NAD_binding_8
HI0933_like
DAO
Thi4
AlaDh_PNT_C
FAD_binding_3
Pyr_redox
Lycopene_cycl
3HCDH_N
NAD_Gly3P_dh_N
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AZR81492
LinkDB
All DBs
Position
859244..862129
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AA seq
961 aa
AA seq
DB search
MKLRLAPQPLEWIDRKASVTFEFEGKPVKGFKGDVISSALWAEGTKVLGRSFKYHRRRGV
MSLANHDVNALFQAEDRPNVRGDVVAPENGMSLTAVNTFGSLANDKGALVELIGKFLPVG
FYYKAFYSPKFLFPKWERLIREMAGLGKVDTRWTEERKPKRYRHCDVAVIGAGPSGMAAA
IQAAKQGVDVCLIDENPHIGGSLDYQFVNESAQTLNRHYLKETIESTPNIHVITSAYVAG
YYGDHWLSINTNDGLIKLSAQSVVVATGVFEQPAVFRNNDLPGVMNASAAQRLMTRYAVA
PCTESVVLTANAEGYRAALDLHQNGLVVKAIIDTGRTEGEWVEQAKQAGMVVYENAEMVE
ALGRKQLEGVIFKTNGTEKRLLCDGLLMSVGWAPAGAPLYQAGAKFGYNATVEQLLPVTL
PEGVFACGRINGVYDIENRIKDGEQAGLAAALYMKGQALPEVEDYRATAAHSHPYPIWAH
PKGKEFVDFDEDIQIKDLKGAIAQGFDNIELMKRFSTIGMGPSQGKHSNMNGIRMLAKLT
GKTIDQTGSTTARPMFHPTPVSHLGGMRFRPERLTPIHPFHEEENACFMEAGNWLRPEYY
PTEMTRETSIQAEVEAVRNSVGLIDVSTLGKLDVFGRDAGELMDRLYTMRMSNMAIGASR
YALMVDDSGVVIDDGVAIRYSDEHFYVTTTTSTSDSAYRLIQKKVIEWGLKVTVLNRTGQ
IGAMNLAGPNSRKILEKLCDIDLSTEAFPYLAMRQGKMLGLDVTLIRVGFVGELGYEIHT
DSQSALTIWKALMSAGQAYGIKPFGVEAQRLLRLEKGHIIVGQDTDGLTNPFEANMPWAV
HFKKPYFLGKPSLVRLKETKMRTLVGFELLSDNPNDQPLESNLVIEADEMIGRVTSIGSS
ATLKKVIGLAMISTDYSMANNVLSIKLTDGRFVKAKVVKTPFYDPEGLMQKPDETAEGDA
A
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttagactcgcgccacagccattggaatggattgatcgcaaagcgtcggttacc
ttcgaattcgaaggtaaaccggtcaaaggtttcaagggagatgtgatcagtagcgcttta
tgggccgagggcacgaaagtgttgggccgcagttttaaataccaccgtcgtcgcggcgtg
atgagtttggccaaccacgacgtcaatgctttgtttcaggccgaggacagaccgaatgtc
cgcggtgatgtggtggcgccggaaaatggcatgtcactgaccgctgtcaacacctttggc
tctttggcgaacgacaagggtgcattggtggagttaatcggaaagtttctgccggtcggt
ttctactataaagccttttattcgccgaaatttctgttcccgaaatgggagcgtttgatt
cgtgaaatggcaggcctgggcaaagtggatactcgctggactgaagagcgtaagccaaag
cgttatcgtcattgtgacgtcgcggtcatcggcgccgggccttcggggatggcggcggcc
attcaagcggccaagcaaggcgtggatgtctgtttgattgacgaaaatccacacatcggc
ggttcgttggattatcagtttgtgaacgaaagtgcgcagacattgaaccgccattacttg
aaagaaaccatcgaatccacaccgaatatccatgtaatcacatcggcctatgtggccggg
tattacggcgaccattggttgtcgatcaataccaatgacggtttgattaaattgtcggcg
cagtccgtggtggtcgccacgggcgtgttcgagcaaccggcggtgttccgtaataatgat
ttaccgggggtgatgaatgcttccgccgcgcaacgtctgatgacgcgttatgccgtcgcc
ccttgtaccgaatcggtggtgctgaccgctaatgccgaaggctatcgtgccgcgctcgac
ttgcatcagaacggtttggtggtgaaggcgattatcgataccgggcgcaccgaaggcgag
tgggtcgagcaagccaaacaggccggcatggtggtgtatgaaaacgcggaaatggtcgaa
gcgctggggcgcaaacaactggaaggggtgattttcaaaaccaacggcacggaaaaacgt
ttgttgtgtgacggcttgttgatgagcgtgggctgggcaccggccggcgcacctttgtat
caggcgggcgctaaattcggttacaacgccaccgtggagcagttgttgccggtgaccttg
ccggaaggtgtgttcgcgtgcggccgcatcaacggtgtttacgacattgaaaaccggatt
aaggacggtgaacaagctgggctggcggcggctttatatatgaaaggccaggcattgccg
gaagttgaagattaccgtgccacagccgcgcattcgcatccgtacccgatttgggcgcat
ccgaaaggcaaagagtttgtcgacttcgatgaagatattcagatcaaggatttgaaaggg
gcgattgcgcaagggttcgacaatatcgagttgatgaaacgtttctcaaccatcggtatg
gggccaagccaaggcaaacacagcaatatgaacggcatccgcatgttggcgaaactgacg
gggaaaaccatcgaccaaaccggttccacgaccgcgagaccgatgtttcacccaacaccg
gtttcgcacttgggtgggatgcgtttccgtccggagcgtttgacgccgatccatccgttt
cacgaagaagaaaatgcctgttttatggaagccggtaactggttgagaccggaatattat
ccaaccgaaatgacccgtgaaacctcgattcaggctgaagtcgaagcggtacggaattcc
gtcgggttgattgacgtttcgacgctgggcaagctggatgttttcggacgggatgccggg
gagttgatggaccgactgtacaccatgcgcatgtcgaatatggcgattggcgccagccgt
tatgccttgatggtggacgattccggagtggtcatcgacgatggtgtcgcgattcgctat
tccgacgaacatttttatgtgaccaccacgacgtcaacgtcggattcggcctaccgcttg
attcagaaaaaagtcatcgagtggggcttgaaggtcacggtattgaaccgcaccgggcag
attggtgccatgaacctggccggtccgaacagccgcaagattctggaaaagctttgtgat
attgatttatcgacggaagccttcccgtatctggcgatgcgccaaggcaaaatgctgggg
ttggatgtcaccttgattcgggtcggtttcgtgggcgaattggggtatgaaatccatacc
gattcgcaatcggcattgaccatttggaaggcgctgatgagtgccggtcaagcctatggt
atcaagccgttcggtgtggaagcgcaacgactgcttcgtttggagaaaggccacatcatt
gtcggccaggataccgatggcttgaccaacccgttcgaggccaatatgccatgggcggtg
catttcaaaaaaccgtatttccttggcaaaccgagtttggtgagattgaaagaaaccaag
atgcgtaccttggttgggttcgaattgttgtctgacaacccgaacgaccagccgctggaa
tcaaaccttgtgattgaagccgacgagatgattgggcgtgtgaccagtatcggtagcagt
gccacactgaaaaaggtcatcggtttggcgatgatttcaaccgattattcaatggcgaat
aatgtgctgagcatcaaattgaccgacggtcgatttgtgaaggcaaaagtggttaaaacc
cctttctatgatccggaagggttaatgcaaaaaccggacgaaacagcagaaggagacgcg
gcatga
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