Thiomicrospira sp. S5: AYJ59_04300
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Entry
AYJ59_04300 CDS
T05796
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio00220
Arginine biosynthesis
thio00791
Atrazine degradation
thio01100
Metabolic pathways
thio01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
AYJ59_04300
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
AYJ59_04300
Enzymes [BR:
thio01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
AYJ59_04300
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_3
HlyD_D23
ATP-grasp
RnfC_N
DUF2118
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AZR81574
UniProt:
A0A3Q9I418
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Position
complement(957520..961143)
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AA seq
1207 aa
AA seq
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MFKKVLIANRGAIATRIIRTLRAMGIQSVVLASDADRTSLHVLEADEVISLPGNVATETY
LNVPLILEHAQELGVEAIHPGYGFLSENAGFAETCESMGIRFIGPTPEHIRDFGLKHTAR
ELAIKAEVPLLPGSDLLESLEAALEEAERIGYPVMLKSTAGGGGIGMQRCDDADALSEAF
EQVARLSQNAFGQSGIFLEKFVVNARHIEIQIFGDGLGQVVSFGERDCSLQRRNQKVVEE
TPAVGISREQVAEMEAHAVRLGELVSYRSAGTVEYVYDADTEQYYFLEVNTRLQVEHGIT
EAVRDVDLVEWMIQVAFDQTFPGLVKPAQGHAIEVRVYAEDPFKNFQPSSGRLTGWKMPS
DCRVDTWCSSGQEVSSFYDPMLAKIIVKGQNRDDAVAKLQTAMNETRIDGFETNATYLKT
LSHAEAFIKAENLYTRFLNGFTHQPDTVEITNAGTHSMLISYPGRTGYWDIGVPPSGPMD
ALSHRLANRCLGNADDAATIEMTVSGVSMTFDRDAVICITGADVQPTLDKQPIPQWQAVE
VKAGQQLKSKVIKSLGQRAYLAIQGGFSVPDYMGSKTTFSLGGFGGHAGRLLRAGDVLHI
PADTAGISATQPIPAELIPNLENEVEIAVIYGPQGSPDFFTEGDINTFFSTAWEVHYNSS
RTGIRLIGPKPTWARTDGGEAGLHPSNIHDNAYAIGAIDFTGDMPVILAQDGPSLGGFVC
PATIIEAEQWKMGQLRPGDTVRFKPVSIDTAEAALKAQDAAINALEATTVSDLTYLSEPT
EQPCLAKELPAGEHEFGVKYRRSGDSHVLIEYGAMELDLALRFRIQVLTDKLKELKNDQA
WAFLKDLTPGIRSLQVHYNPRQIAQNDLIQKLVDLEAEISSAKDLTVKSRIVKLPLSWDD
PSTRLAIEKYMNSVRPDAPWCPSNIEFIRRINGLDSIEDVKRIVFEAKYLVMGLGDVYLG
APVSTPLDPRHRLVTTKYNPARTWTPENAVGIGGAYMCVYGMEGPGGYQFVGRTIQMWNA
YRNTQYFPQGKPWLLDFFDQIQFYPVSEDELKQARHDFPLGRFDIDIEETTLSLADYQAF
LAEEADSIAEFQTKQKAAFEAERQRWEANGQANYEDTSSQEEIQNEPMAEIPEGFEAALS
PITGSVWKIQVKPGDAVAEGDVIAILETMKIEIPIEAEYDGTVTEILINEGDLIQNGQAL
LVMEVSE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaagttctcatcgccaaccgtggcgccatcgctacccggattatccgcaca
cttcgcgccatgggcatccaatcggtggtgctggcgtccgacgccgaccgtacatcgctg
cacgtgctggaagccgacgaagtcatttccctaccgggcaatgtcgccaccgaaacctac
ttgaacgtgccgctgattctggagcacgctcaggaattgggcgtcgaagcaatccatccg
ggctacggttttttaagtgagaacgccggtttcgccgaaacctgtgaaagcatgggcatc
cgattcatcggccccacgcccgaacacatccgcgatttcggtttaaaacacaccgcacgc
gaactggccattaaagccgaagtgcccctactgcccggctccgatttgctcgaatcgctc
gaagcggcattagaagaggccgagcgcatcggttacccggtcatgctgaaaagcacggcc
ggcggtggtggcatcggcatgcagcgttgcgacgacgccgacgcgctttccgaagcgttt
gaacaggttgcgcgtttgagccaaaacgccttcggccaaagcggcatttttctggagaaa
ttcgtcgtcaacgcccgtcacatcgaaatccaaattttcggtgacggtctgggccaagtc
gtttccttcggcgagcgtgactgttccttgcagcgccgtaaccaaaaggtcgttgaagaa
accccggccgtgggcatttcccgcgaacaggtcgcggaaatggaagcccacgccgtgcgc
ctcggcgagctggtcagctaccgctccgccggcacggtggaatacgtttatgacgccgac
accgaacaatactatttcctcgaagtgaacacgcgtttgcaggtcgaacacggcatcacc
gaagcggtgcgcgacgtcgacttggtggaatggatgattcaagtcgcctttgaccaaact
ttcccaggcctggtcaaaccggcgcaaggccacgccattgaagtccgtgtttacgccgaa
gacccgttcaagaatttccagccaagttccggccgtctcaccggctggaaaatgccgagt
gactgccgagtggatacctggtgcagcagcggtcaggaagtcagctccttctacgacccg
atgctggcaaaaatcatcgtcaaaggccaaaaccgtgacgacgccgtggccaaactgcaa
accgccatgaacgaaacccgcatcgacggtttcgaaaccaatgcgacttatttgaaaacc
ctcagccatgccgaagcgttcatcaaagccgaaaacctctatacgcgctttttgaacggt
tttacccatcagcccgatacggtcgagatcaccaacgccggcacccactccatgctcatt
agttatccgggccgaaccggttattgggacatcggcgtgccgccgtccgggccgatggac
gccctatcacaccgattggccaaccgctgtctgggcaatgccgatgacgctgcaaccatc
gaaatgaccgtatccggcgtcagcatgaccttcgaccgcgatgccgtcatctgcatcacc
ggggccgatgtgcaaccgacgctggataaacagccaattccgcagtggcaagccgtggaa
gtgaaagccggtcaacaactgaaatccaaagtcatcaaatccttgggacagcgggcgtat
ctcgccatccaaggcggcttcagcgtaccggattacatgggcagtaaaaccaccttctcg
ctgggcggcttcggcggccatgccggacggttgctgcgcgccggcgacgtcctgcacatt
ccggcggacaccgccggcatcagcgccacccagccgattccggccgaactgattcccaac
ctggaaaacgaggtggaaatcgcggtgatttatggtccgcaaggctcaccggatttcttc
accgaaggcgacatcaacaccttcttctccaccgcttgggaagtccactacaactccagc
cgaaccggcatccgcctgatcggtccgaaaccgacctgggcgcgaacggacggtggcgaa
gccggtctgcatccatccaacattcacgacaacgcttacgccatcggtgccatcgacttc
accggcgacatgccggtcatcctggcgcaggacggcccgagcttgggcgggtttgtctgc
cccgccaccatcatcgaagccgagcaatggaaaatggggcaattacgtcccggcgacacc
gtgcgcttcaagccggtgtccatcgacaccgccgaagccgcactcaaagcgcaggacgcc
gccatcaacgccttggaggccacgaccgtttccgacctgacctatctgtcggaaccgacc
gaacaaccctgcttggcgaaagaactgcccgccggcgaacacgaattcggcgtcaaatac
cgtcgttccggcgacagccatgtgctcatcgaatacggcgccatggaactggacttggcg
ttgcgcttccgcattcaggtgctgaccgacaaattgaaagaactcaaaaacgaccaggcc
tgggcgtttttgaaggatttaacgccgggtatccgttccttgcaggtgcactacaacccg
cgccaaattgcccaaaacgatctgattcaaaagctggtcgatctggaagcggagatttca
tccgccaaagacctcacggtgaaaagccgcatcgtcaaattaccgttgtcatgggatgat
ccgagcacccgcctggccatcgaaaaatacatgaattcggtgcgcccggatgcgccttgg
tgcccgagcaatatcgagttcatccgccgcattaacgggttggattcgattgaagacgtc
aaacgcatcgttttcgaagccaagtatctggtcatggggttgggcgacgtttaccttggt
gcgccggtctccacgccattagacccgcgccatcgcttggtcaccaccaaatacaacccg
gccagaacctggacgccggaaaatgccgtgggcatcggcggcgcttatatgtgtgtttac
ggcatggaaggcccaggcggttatcagtttgtggggcgcactatccaaatgtggaacgcc
tatcgcaacacccaatatttcccacagggcaaaccttggttgctggatttcttcgaccag
attcagttctatccggtcagtgaagacgagttgaaacaggcacgccacgacttcccgttg
ggccgtttcgacatagacattgaagaaaccaccttgtctctggccgattatcaggcgttc
ctggccgaagaagccgacagcatcgccgaattccagaccaagcaaaaagccgctttcgaa
gccgaacgccaacgttgggaagccaacggccaagccaactacgaagacacgtcatcccaa
gaggaaattcaaaacgaaccgatggccgaaatcccggaaggctttgaagccgccctgtcg
ccgattaccggcagcgtctggaaaattcaggtcaaaccgggcgatgcggtggccgaaggc
gatgtcatcgccattctggaaaccatgaaaatcgaaattccgattgaagcggaatacgac
ggcaccgtcaccgaaattctcatcaacgagggggatttgattcaaaatggccaggcctta
ttggtcatggaggtatcggaatga
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