Thiomicrospira sp. S5: AYJ59_05435
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Entry
AYJ59_05435 CDS
T05796
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
thio
Thiomicrospira sp. S5
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thio03016
]
AYJ59_05435
Enzymes [BR:
thio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AYJ59_05435
Transfer RNA biogenesis [BR:
thio03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AYJ59_05435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AZR81774
UniProt:
A0A3S9TMX0
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All DBs
Position
complement(1202549..1203697)
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AA seq
382 aa
AA seq
DB search
MTYTFIDTQADLSAFCELIEADGWFAIDTEFVRTDTYFPKLCLIQIQSRSGHAAIIDPMA
FDALEPLWQLLENPNIRTVFHSARQDIEVLYQVSGRMPVAIYDTQIAGVFLGYGDLAGLA
KVIKAELDIELEKDQTRTDWSRRPLTDKQLEYAINDVRYLAPLYERYLDKLTEAQQAALT
EDFEALLNEDLYRLAPENAADKIKAVQKLPRKAQAIAYRLAEWRELYAINHNKPKRWVLS
DDALVAIAKRPPKAREALYKVPNIKASSVKNFGDEWIEIIDDVFANPDAWPEAPNKPAPA
TPQEDIFINIGFALLQQVAQDYHINPPNIAGKADLLRLIRQPETHLAGWRQTLFGQPFSD
FLKGNIGLTCDNQRLIQKTFTP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacctatacctttattgatacccaggcggatttatcggctttctgcgagcttatcgaa
gccgacggctggttcgccatcgacacggaattcgtgcgtaccgatacctatttcccgaaa
ctgtgcttgattcaaatccaaagccgttccggtcacgccgccatcatcgacccgatggca
ttcgacgcactcgaaccgttgtggcaattactggagaacccgaacatccgaacggtcttc
cactccgcccgtcaggacatcgaagtattgtatcaagtttccggccggatgccggtggcg
atttacgacacccaaatcgccggtgtttttctcggatacggcgacctggcaggcctggcc
aaagtcattaaagccgaactcgatatcgaactggaaaaagaccagacccgaaccgattgg
agccgacggccactgaccgataagcaactggaatacgccatcaacgacgtgcgttatctg
gccccgttatacgagcgctatctcgacaagctcaccgaggcgcaacaagcggccttaacc
gaagacttcgaagccctgctgaatgaagacctttaccgcctcgccccggaaaacgccgcc
gacaaaatcaaagcggtgcaaaaactgccgcgcaaagcccaggccatcgcctaccgttta
gccgaatggcgcgaactctacgccatcaatcataacaagcccaagcgctgggtgctgtcg
gacgacgcgttggtggccattgccaaacgcccaccgaaagcgcgcgaagccttatacaaa
gttccgaatatcaaagcgtcctcggtaaaaaattttggtgatgaatggattgagattatc
gacgacgtttttgccaaccctgatgcctggccggaagcgcccaataaaccggctccggcc
acgccacaggaagatattttcatcaacatcggttttgctttattgcaacaagtggctcag
gactaccacattaacccaccgaatatcgccggaaaagccgatttactccgcctgattcgt
caaccggaaacccaccttgccggttggcgtcagaccctgttcggccagcctttttcggac
tttttgaagggtaatatcggattgacgtgtgacaaccaacgcctcattcaaaaaactttc
accccataa
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