Thiomicrospira sp. S5: AYJ59_06665
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Entry
AYJ59_06665 CDS
T05796
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
thio
Thiomicrospira sp. S5
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thio03009
]
AYJ59_06665 (rimO)
Enzymes [BR:
thio01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AYJ59_06665 (rimO)
Ribosome biogenesis [BR:
thio03009
]
Prokaryotic type
ribosomal protein modification factors
AYJ59_06665 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
BpuJI_N
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AZR81993
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Position
1465446..1466822
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AA seq
458 aa
AA seq
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MSQQNPTVGIVSLGCPKATVDSERILTQLKAEGYHLTNSYEEADTVIVNTCGFIDSAVQE
SLDTIGEALEENGKVIVTGCLGGKDDNQIKEIHPKVLAVSGPAAYEEVLTAVHEVIAPPA
HDPFVDLVPPQGIKLTPKHFAYLKISEGCNHRCTFCIIPSMRGDLVSRPASDVVAEAKRL
KEAGVKELLVVSQDTAAYGVDVKYKTDFADGRPTKTSMLGLAEALGELGNQDDFWVRLHY
VYPYPNVEEVIPLMAQGKILPYLDMPLQHADPDILKAMKRPGNVDKTLERIQKWREQVPD
LTIRSTFIVGFPGETEEQFQNLLDFITEARLDRVGCFQYSPVEGAVANDLAEPVPDDIKQ
ERFDRFMQLQQQISAEKMQAKIGRTMQVLVDEVDEEGAIARSQADAPEIDGLVFIPEGHH
LNPGDFVEVEIFAADEYDLWGNPVGEFTAQETSYVELG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacagaacccgaccgttggaatcgtgagtttggggtgtccgaaagctaccgtc
gattcggagcggattctcacccagctcaaagccgagggctatcatttaaccaattcctat
gaagaggcggatacggttattgtcaacacctgcggatttatcgacagcgcggtgcaggaa
tcgttggataccattggggaagccttggaggaaaacggtaaagtcatcgttaccggctgt
ttgggtgggaaagacgataaccaaatcaaggagattcacccgaaagttttggcggtttcc
ggcccggcagcttatgaagaagttttgacggcggtgcatgaagtgattgcgccaccagca
cacgatccgtttgtggatttggtgccgccgcagggcatcaagttgacgccgaaacacttt
gcttacctgaagatttccgaaggctgtaaccatcgttgtaccttttgcattatcccgtca
atgcgcggtgatttggtcagccgcccagcgtcggatgtggtggcggaagccaaacgtttg
aaagaagccggcgtcaaggaattgttggtggtgtcgcaagacacggccgcttatggcgtg
gacgtcaaatataaaaccgatttcgccgacggccgtccgaccaaaacctccatgcttggc
ttggccgaagcactgggtgagttggggaatcaggacgacttctgggtgcgcttgcattat
gtttatccctacccgaatgtcgaagaggtgattccgctgatggctcagggcaaaatcttg
ccgtatctcgatatgccattacagcatgccgatccggatatcctgaaagccatgaagcgt
cctgggaatgtcgataaaaccctggaacgtattcagaagtggcgcgaacaggtaccagac
ctgaccattcgttccacctttatcgtcgggtttcctggagaaaccgaggagcagttccag
aatttactggactttattactgaagctcgcttggatcgagtgggctgtttccagtattcg
cccgtggaaggcgccgtggccaatgacctagccgaaccggtgccggacgacatcaagcag
gagcggttcgatcgttttatgcaattgcagcagcaaatcagtgccgagaagatgcaagcc
aaaatcggccggaccatgcaggtgttggtggacgaggtggacgaagaaggtgcgattgcc
cgctctcaagcggatgcgccggaaattgacggtctggtgtttattccggaagggcatcat
ctgaaccccggcgactttgtcgaggtagagatttttgcggcggatgaatatgacttgtgg
ggcaacccggtgggtgagtttacggctcaagaaacctcttatgtcgagttggggtaa
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