Thiomicrospira sp. S5: AYJ59_07400
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Entry
AYJ59_07400 CDS
T05796
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
thio
Thiomicrospira sp. S5
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thio03032
]
AYJ59_07400
03036 Chromosome and associated proteins [BR:
thio03036
]
AYJ59_07400
03400 DNA repair and recombination proteins [BR:
thio03400
]
AYJ59_07400
DNA replication proteins [BR:
thio03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AYJ59_07400
Chromosome and associated proteins [BR:
thio03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AYJ59_07400
DNA repair and recombination proteins [BR:
thio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AYJ59_07400
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_euk_1
HTH_31
Xre-like-HTH
HTH_24
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AZR82123
UniProt:
A0A3S9TNM3
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Position
complement(1614111..1614383)
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AA seq
90 aa
AA seq
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MNKTELVSAIAEEAGLTKADAAKALEATVSTVTKALSSGDSVAIIGFGTFKVGERSARTG
RNPQTGAEMQIPAAKVPKFSAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaccgaattagttagtgcgatcgctgaagaagcaggtttaacgaaagcagat
gccgctaaagcgctagaagcaactgtgtccactgttacaaaagccttgagctcaggtgat
tcagtcgccatcattggatttggtacttttaaagttggtgagcgttcagcacgtactggt
cgtaaccctcaaacaggtgcagaaatgcaaatccctgcggcaaaagttcctaagttctca
gctggtaaagcacttaaggacgctgttaactaa
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