KEGG   Thiomicrospira sp. S5: AYJ59_07400
Entry
AYJ59_07400       CDS       T05796                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
thio  Thiomicrospira sp. S5
Brite
KEGG Orthology (KO) [BR:thio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thio03032]
    AYJ59_07400
   03036 Chromosome and associated proteins [BR:thio03036]
    AYJ59_07400
   03400 DNA repair and recombination proteins [BR:thio03400]
    AYJ59_07400
DNA replication proteins [BR:thio03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AYJ59_07400
Chromosome and associated proteins [BR:thio03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AYJ59_07400
DNA repair and recombination proteins [BR:thio03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AYJ59_07400
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 HU-CCDC81_euk_1 HTH_31 Xre-like-HTH HTH_24 HTH_23
Other DBs
NCBI-ProteinID: AZR82123
UniProt: A0A3S9TNM3
LinkDB
Position
complement(1614111..1614383)
AA seq 90 aa
MNKTELVSAIAEEAGLTKADAAKALEATVSTVTKALSSGDSVAIIGFGTFKVGERSARTG
RNPQTGAEMQIPAAKVPKFSAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataagaccgaattagttagtgcgatcgctgaagaagcaggtttaacgaaagcagat
gccgctaaagcgctagaagcaactgtgtccactgttacaaaagccttgagctcaggtgat
tcagtcgccatcattggatttggtacttttaaagttggtgagcgttcagcacgtactggt
cgtaaccctcaaacaggtgcagaaatgcaaatccctgcggcaaaagttcctaagttctca
gctggtaaagcacttaaggacgctgttaactaa

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