Thiomicrospira sp. S5: AYJ59_08690
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Entry
AYJ59_08690 CDS
T05796
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio03030
DNA replication
thio03430
Mismatch repair
thio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYJ59_08690
03430 Mismatch repair
AYJ59_08690
03440 Homologous recombination
AYJ59_08690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thio03032
]
AYJ59_08690
03400 DNA repair and recombination proteins [BR:
thio03400
]
AYJ59_08690
Enzymes [BR:
thio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYJ59_08690
DNA replication proteins [BR:
thio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYJ59_08690
DNA repair and recombination proteins [BR:
thio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYJ59_08690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AZR82355
LinkDB
All DBs
Position
1888680..1889375
Genome browser
AA seq
231 aa
AA seq
DB search
MRQILLDTETTGFDPKTGDRIIEIGAVELVKRKLTHNNYHQYIQPERDVPQDAIDVHGIT
NEFLTDKPVFAQVVDDFMNFVAGAELIIHNAPFDVGFINHELSMLPDNKWGTIEAHCKIT
DSLKMARKAYPGQRNSLDALCKRFDIDNSNRTLHGALLDSEILADVYLAMTGGQTDLMLM
NEDPNANQNQEVNLSHQRPPLKVLRASDTELEAHASKLAAISKASERTIQW
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaatactactggatacggaaaccacgggcttcgacccgaaaaccggcgaccga
atcatcgaaatcggggccgtggaactggtcaaacgaaaactcactcacaacaactaccat
caatacattcagccggaacgcgacgtcccacaagacgccattgacgttcacggcattacc
aacgaatttttgaccgataaaccggtattcgctcaagtggtggacgactttatgaatttc
gtcgccggagccgaactcatcatccacaacgcgcctttcgacgtggggtttatcaaccac
gaattatcgatgctgccggataacaaatggggcaccatcgaagcacactgcaaaattacc
gactctttgaaaatggctcgcaaagcctatcccggccagcggaattccctggatgcgctc
tgcaaacgcttcgacatcgacaattccaatcgtaccttgcacggcgccttactcgactcc
gaaatcctggccgatgtttacctggccatgaccggcggacagacggatttaatgctgatg
aatgaagaccccaacgccaatcagaatcaagaagttaacctgagccatcagcggccacct
ctcaaggtgcttcgtgcgtccgacaccgaactcgaagcccacgccagcaaactggccgcc
atcagcaaagcgagtgaacgcaccattcaatggtag
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