Thiomicrospira sp. S5: AYJ59_09285
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Entry
AYJ59_09285 CDS
T05796
Name
(GenBank) peptidase S13
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio00550
Peptidoglycan biosynthesis
thio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYJ59_09285
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thio01002
]
AYJ59_09285
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thio01011
]
AYJ59_09285
Enzymes [BR:
thio01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AYJ59_09285
Peptidases and inhibitors [BR:
thio01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
AYJ59_09285
Peptidoglycan biosynthesis and degradation proteins [BR:
thio01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
AYJ59_09285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AZR82457
UniProt:
A0A3Q9I5Y6
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Position
complement(2007423..2008694)
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AA seq
423 aa
AA seq
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MLAGLALSCFVSFTASAAALESELAKRPTSGLLLLNAAEQPLVSNQAERLLIPASTTKLV
TGYLALDHWGRDHRFKTDFRVVRRASDGAVILWVKGYGDPFLVSEELQTIASRLGSALGD
RGVSHLDAIYLDAGYFQPGLVLPGTTDTLNPYDAHPSALAANFNTLFLKSDDGEIVSAES
QTPLTRLAVEIGHETDLSNGRFNLGPDVRLGQRYFAELLGAFLKQQGVTVADDVQWHPMT
EARGPGLRELLSYRHLNSLTLGEMVAPMMRYSTNFIANQLALKLAAEAYGEPATADKVKQ
LLNSRLKRRFGWRDFYLEDGAGLSRKNRLSARQLVDVLERFRPWKDLLPEVEPDIYAKTG
TLIGVSALAGYIKNDQAWSPFALLVNQKVPFHYRNQVALQLKQRLADEAALLSQRPESYG
SVN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgcgggcttggcgctgtcctgcttcgtgtcgttcacggcatcggccgccgctttg
gagtcggagctggcgaaaaggccgacctcgggactcttgttgctgaacgctgccgagcaa
ccgttggtgtcgaatcaagcggagcggttattgattccggcttccaccaccaaattggta
acgggttatttggcgttggatcactgggggcgcgatcaccgttttaaaaccgattttcgg
gtggtgagacgagcgtcggacggcgcggtgattttgtgggtcaaaggctatggcgaccca
tttttggtgtcggaagaattgcagaccatcgcatcgcgtttgggatccgccttgggggat
agaggcgtgtcgcatctggatgcgatttatttggatgccggttattttcagcccggcctg
gttttgcccggcaccaccgatactctgaatccttatgatgcgcatccgagtgcgttggcc
gcgaattttaatacgctgtttttgaagtcggatgacggtgaaatcgtatcggccgaatcg
caaacccctttgacgcgcttggcggttgagattggtcatgaaaccgatctgagcaatgga
cgttttaacctggggccggatgtccgtttggggcaacgttattttgccgaattgttgggg
gcttttttgaaacagcagggcgtgacggtggcggatgatgtgcaatggcatcctatgacc
gaagccagaggtcctggcttgcgtgagttattgagttatcgccacctgaattccttgacg
ctgggtgaaatggtggcgccgatgatgcgttattcgaccaattttatcgccaatcaattg
gcgctgaagctagcggcagaggcctatggcgaaccggccacggcggataaggtgaagcag
ttgctgaacagtcgcttgaagcgccgttttggttggcgggatttttatctggaagacggc
gccggtctgtcgcgaaaaaatcggttgagtgcgcggcagttggtggatgtgttggagcgt
ttccggccatggaaggatcttttgccggaagtggagccagatatctatgccaagaccggg
accttaattggggtcagtgctttggcgggttacatcaaaaatgaccaggcctggtcaccg
tttgccttgctggtgaatcagaaggtgccgtttcattatcgcaaccaagtggcactgcaa
ttaaagcaacgtttggcggacgaggcggcgctactcagtcaacgcccagaatcttatggg
tctgtaaactga
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