Thiomicrospira sp. S5: AYJ59_09665
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Entry
AYJ59_09665 CDS
T05796
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AYJ59_09665 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thio03019
]
AYJ59_09665 (rnc)
03009 Ribosome biogenesis [BR:
thio03009
]
AYJ59_09665 (rnc)
03036 Chromosome and associated proteins [BR:
thio03036
]
AYJ59_09665 (rnc)
Enzymes [BR:
thio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AYJ59_09665 (rnc)
Messenger RNA biogenesis [BR:
thio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AYJ59_09665 (rnc)
Ribosome biogenesis [BR:
thio03009
]
Eukaryotic type
90S particles
RNase
AYJ59_09665 (rnc)
Prokaryotic type
rRNA processing factors
AYJ59_09665 (rnc)
Chromosome and associated proteins [BR:
thio03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AYJ59_09665 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AZR82521
LinkDB
All DBs
Position
complement(2088105..2088803)
Genome browser
AA seq
232 aa
AA seq
DB search
MSEVEKRAKLERLSKRLGYQYQNLDFLQRALTHRSMGAKNNERLEFLGDSLVNFIIADAL
FHQFHKISEGDLSRIRAFLVKGETLAKIGKEYQLSDYLMLGPGELKSGGYRRESIIADAV
EAIIASVYEDGGLEACRDFVLRLYHKRLKELDPSKVGKDPKTRLQEFLQSNHEQLPEYSV
ITVNGPAHAQEFTVSCYVAKLNRKFEATATNRRKAEQIAAEEALDILENAND
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagttgaaaagcgtgctaagttagagcgactttcaaaacggctgggttaccaa
taccaaaaccttgatttcctgcagcgtgccctgacgcatcgcagcatgggcgctaaaaac
aatgaacgattggagtttctgggagacagtcttgttaacttcattatcgccgatgccctg
tttcatcagtttcataaaatttccgaaggggacttgagtcgtattcgagcctttctggtc
aagggcgaaacgctggccaagatcggaaaggaatatcagttgtcggactacctgatgctc
ggaccgggggagttgaaaagcggcggttatcgtcgtgaatcgattatcgccgatgcggtc
gaagcgattatcgcttccgtttatgaagacggcggtttggaagcctgtcgtgatttcgtc
ttgcgactgtaccataaacgcttgaaagaactggacccttccaaggttggcaaagacccg
aaaacccgtttgcaggaatttttacaatccaatcatgagcagttgccggaatacagcgtg
attaccgttaacggaccggctcatgctcaagaatttacagtttcttgttatgtagccaaa
ctgaatcgtaagtttgaggcgacggccaccaatcgtcgtaaagcggagcaaattgcggcc
gaagaggcgcttgacattctggagaatgccaatgactga
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