Thiomicrospira sp. S5: AYJ59_11155
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Entry
AYJ59_11155 CDS
T05796
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio00300
Lysine biosynthesis
thio00470
D-Amino acid metabolism
thio01100
Metabolic pathways
thio01110
Biosynthesis of secondary metabolites
thio01120
Microbial metabolism in diverse environments
thio01230
Biosynthesis of amino acids
Module
thio_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYJ59_11155
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AYJ59_11155
Enzymes [BR:
thio01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AYJ59_11155
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AZR82784
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Position
complement(2414053..2414910)
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AA seq
285 aa
AA seq
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MTNSLRFSKMHGLGNDFMVIDATRDKIELTTDEIRFWANRHFGVGFDQLLMVEPATTPGV
DFRYRIFNADGSEVQQCGNGARCFARFVYDKGLTDKTEIQVETASGLIVLYITDDGGVRV
NMGAPSFLPETLPFDIPVESEQYELEVDGERFEIGAVSMGNPHAVLRVTDVVSAPVAVLG
EKIESHPLFPERVNVGFAERVDDAHIKLRVYERGAAETLACGTGACAAMVVLRRLEEVGD
AVTISLPGGDLLVEWDGNPESPVWMTGPAVFVFEGEIERGVPGRV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactaattccttacgattttccaaaatgcacggtttgggcaatgactttatggtcatt
gatgcgacacgcgacaaaatcgagctgacgaccgacgaaatccgtttttgggccaaccgg
catttcggcgtggggtttgaccagttgttgatggtggaaccagccacgacgccgggggtg
gatttccgttaccgtattttcaatgccgacggttcggaggtgcagcagtgcggtaatggc
gcgcgttgtttcgcgcgttttgtgtacgacaaagggttgacggacaaaaccgaaattcaa
gtggaaaccgcatccggcctaatcgtgttgtacatcaccgacgacggtggggtgcgggtc
aatatgggcgcgccgagcttcttgccggaaaccttgccgttcgacattccggtggaatcg
gaacaatatgaattggaagtggacggtgaacggtttgaaatcggcgcggtgtcgatgggc
aatccgcacgccgtcttgcgagtgactgatgtggtgtccgcgccggtggcggtgttgggc
gagaaaatcgaatcgcatcccttgtttccagaacgcgtcaatgtcggttttgccgagcgg
gtggacgatgcacacatcaaattgcgggtgtacgaacgcggcgcggcggaaacgttggcc
tgcggcaccggcgcttgtgcggccatggtggtgttgcgccgcctggaggaagtcggcgat
gcggtgacgatttcattaccgggtggcgacttgctggtggaatgggatggcaacccggag
agtccggtgtggatgaccggaccggcggtgtttgtgtttgaaggtgaaatcgaaagaggg
gtgccagggcgagtgtaa
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