Thiomicrospira sp. S5: AYJ59_11475
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Entry
AYJ59_11475 CDS
T05796
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYJ59_11475 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thio03019
]
AYJ59_11475 (groEL)
03110 Chaperones and folding catalysts [BR:
thio03110
]
AYJ59_11475 (groEL)
03029 Mitochondrial biogenesis [BR:
thio03029
]
AYJ59_11475 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thio04147
]
AYJ59_11475 (groEL)
Enzymes [BR:
thio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AYJ59_11475 (groEL)
Messenger RNA biogenesis [BR:
thio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AYJ59_11475 (groEL)
Chaperones and folding catalysts [BR:
thio03110
]
Heat shock proteins
HSP60 / Chaperonin
AYJ59_11475 (groEL)
Mitochondrial biogenesis [BR:
thio03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AYJ59_11475 (groEL)
Exosome [BR:
thio04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AYJ59_11475 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AYJ59_11475 (groEL)
Exosomal proteins of breast cancer cells
AYJ59_11475 (groEL)
Exosomal proteins of colorectal cancer cells
AYJ59_11475 (groEL)
Exosomal proteins of bladder cancer cells
AYJ59_11475 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
AZR82841
LinkDB
All DBs
Position
complement(2479318..2480958)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKDVRLGLDAREKMVEGINVLADAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAREIE
LEDKFMNMGAQMVKEVSSQTNDVAGDGTTTATVLAQSIVREGMKSVAAGMNPMDLNRGIH
KAVEAVVEEIQKMSVPCTTTDSIAQVGTISANSDASVGKMIADAMEKVSTEGVITVEEGS
SLHDELVVVEGMEFDRGYLSPYFVTNQEKMVAELENPYILLHDKKISNIRDLLPTLEAVS
KAGRPLLIIAEDVDGEALATLVINNMRGIVKATAIKAPGFGERRKAMLQDMAVLTGGTVI
SEEVGLTLDNVTLDMLGETKSAVVGKDSTKLIDGAGSKEDIDARCAQIRSQVENTTSDYD
KEKLQERLAKLSGGVAVIKLGAATEVEMKEKKDRVDDALHATRAAVQEGIVAGGGVALVR
ARSKVKVKGDNDEQQVGIEIALRAMEEPMRQIAANCGLEGSVIVNKVMESDGNMGFDAAS
ETYVDMLEAGIIDPAKVTRSALQNAASVAGLVLTTGAAIADLPAKDGGAADAAAAAAGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacgtaagattgggcctagacgcccgcgaaaaaatggtagaagggatcaat
gtcctggcggatgcggttaaagtaaccttggggccaaaaggccgtaacgtggttcttgaa
aaatcattcggtgccccaaccgtcaccaaagatggtgtctccgttgcacgtgaaatcgaa
ttggaagacaagttcatgaacatgggtgcgcaaatggtgaaggaagtttcttctcaaacc
aacgacgtggccggtgatggtaccaccacggcgaccgttttggcacagtccatcgttcgt
gaagggatgaaatcggttgcggccggtatgaacccgatggatttgaaccgtggtatccac
aaagcagtggaagcggttgttgaagaaattcaaaaaatgtccgtaccgtgtacgacaacc
gattcgattgcacaggttggaactatctcggccaactccgatgcgtcggttggtaagatg
atcgccgatgccatggaaaaagtatcgaccgaaggtgtgatcaccgttgaagaaggttct
tcattgcacgacgaactggttgtggttgaggggatggaattcgatcgcggttacctatca
ccttactttgtgaccaatcaggaaaaaatggttgcggagctggaaaacccatacatcctg
ctacacgacaaaaaaatctccaacatccgtgatttgttgcctaccttggaagcggtttcc
aaagccggtcgtccattattgatcattgcggaagacgttgatggtgaagccttggcgaca
ttggttatcaacaacatgcgcggtatcgtgaaagccacggccatcaaagcgcctggcttc
ggtgagcgtcgtaaagccatgcttcaggatatggcggtcttgaccggtggtaccgtgatt
tccgaagaagtcggtttgaccttagacaacgtgactttggacatgttgggtgaaaccaag
tctgcggtcgttggtaaagacagcacgaagttgatcgacggtgccggttcaaaagaagac
atcgatgcacgttgtgcgcaaatccgctctcaagtggaaaacaccacatccgattacgat
aaagagaagctgcaagaacgtttggcgaaattgtccggcggtgttgcggtgatcaagcta
ggtgccgcgactgaagtcgaaatgaaagagaagaaagatcgtgttgacgatgcgcttcac
gcgactcgtgccgcggttcaagaagggatcgtagccggtggtggtgtggccttggttcgc
gcccgttctaaagtgaaagtgaaaggtgataacgacgagcaacaagtcggtatcgaaatc
gctttgcgtgctatggaagaaccaatgcgtcaaatcgcggccaactgtggtctggaaggt
tccgttatcgtcaataaagtaatggaatccgacggaaacatgggcttcgatgccgcttct
gaaacctatgtcgatatgctggaagccggtatcatcgatccggcgaaagtcacgcgttcg
gccttgcaaaacgccgcttccgtagctggtttggtcttgacgaccggtgcggcgattgcc
gatctgcctgcgaaagacggtggtgcagccgatgcggcggcggcagcggccggaatggga
ggcatgggcggcatgatgtaa
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