Thiomicrospira sp. S5: AYJ59_11590
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Entry
AYJ59_11590 CDS
T05796
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AYJ59_11590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thio03021
]
AYJ59_11590
03400 DNA repair and recombination proteins [BR:
thio03400
]
AYJ59_11590
Enzymes [BR:
thio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AYJ59_11590
Transcription machinery [BR:
thio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AYJ59_11590
DNA repair and recombination proteins [BR:
thio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AYJ59_11590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Av_adeno_fibre
Motif
Other DBs
NCBI-ProteinID:
AZR82862
LinkDB
All DBs
Position
complement(2507238..2508227)
Genome browser
AA seq
329 aa
AA seq
DB search
MQEMLEQLLTPRLVDIKTVGGFNSRVTLEPLERGFGHTLGNALRRILLSSMPGAAIVEAQ
IDGVLHEYSAIEGVREDVLEILLNLKEVAIKLNETSEAELTLSKKGPAVVTAGDIQLNHD
TEIMNPDLIIAHLSEGAELSMKLKVEKGIGYRAAVQTDESESANIGVLKLDASFSPVKTV
SYEVQNARVEQRTDLDKLILNVVTDGTLDPEDAIKQAATVLHYQLIAFVDLKHKEIVVQE
EEENEFDPIFLQPVDDLELTVRSANCLKAEQIYYIGDLVQRAESSLLKTPNLGKKSLQEI
KDVLAQRGLGLGTKLENWPPSSLVSKESA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagatgttagagcagctactaactccacgtttagtagatattaaaacggttggc
ggttttaatagccgtgtaactcttgagcctctagagcgtggttttgggcatactctaggg
aatgctttaagaagaatcttattatcttcaatgccgggtgcggcgattgttgaagctcag
attgacggtgtgttgcacgagtattcggcaatcgaaggggttcgcgaagatgttttggaa
atcttgctgaacttgaaagaggttgctattaaattgaatgaaacctcggaagccgaattg
accttgtcgaaaaaagggccagcggtcgtaacagcaggtgacattcagttgaatcatgat
actgaaatcatgaacccagacttgatcatcgctcacttgagcgaaggcgccgaactttcc
atgaaactgaaagtggaaaaaggcatcgggtaccgtgcagcggttcaaacggatgaatcc
gaatcagcgaatatcggtgttctgaaattggatgccagtttcagccctgttaaaaccgtt
agctatgaagttcaaaacgctcgtgttgagcaaagaacggacttggataagctgattttg
aatgtcgtgactgatggaactttggatccggaagatgcgatcaaacaagcggcaacggtg
ttgcattatcaactgattgcgtttgtggatttgaagcacaaagagattgtggttcaggaa
gaagaagagaacgaattcgatccaatcttcttgcagccggtagacgatttggagttaacg
gttcgttctgcaaactgcttgaaagccgaacaaatctactacattggtgatttggttcag
cgtgccgagtccagcttgttgaagacaccgaatttaggtaaaaaatcgttacaagaaatc
aaagacgttcttgcgcaaagaggtcttggtttgggtacaaaacttgaaaactggccgcca
tcaagcctggtgagtaaagagtcagcataa
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