Thiomicrospira sp. S5: AYJ59_12065
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Entry
AYJ59_12065 CDS
T05796
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio03030
DNA replication
thio03430
Mismatch repair
thio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYJ59_12065
03430 Mismatch repair
AYJ59_12065
03440 Homologous recombination
AYJ59_12065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thio03032
]
AYJ59_12065
03400 DNA repair and recombination proteins [BR:
thio03400
]
AYJ59_12065
Enzymes [BR:
thio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYJ59_12065
DNA replication proteins [BR:
thio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYJ59_12065
DNA repair and recombination proteins [BR:
thio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYJ59_12065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AZR82943
LinkDB
All DBs
Position
2591096..2592175
Genome browser
AA seq
359 aa
AA seq
DB search
MSNAQLIFIDKRNQPIKEYIVAVAASDGLDIKGIQVIASPAKGEKALISATLRIPPLEDH
QFDTAKIVDVILDQMVVGNETLTVKQLIEKASDDEEVRKALSKSVKKLRVKLTDLINEFT
RSEVINLIQERRNDALFKLKEHDQAIKGRKVVCIDIEATDICTKDNADIIQVSICDLDGN
EVMNQLINPGYDIPENDKHNICTEMVQDAPYLTEAWEQIHTALAEADTVLAYSTESDFAY
LQKSSEKKMLTFELDYNDWLDVAELSKDLVGALRWQSEKMYWFYKTPKLTDAYEKIMGQP
FPGDAHDALADAQATAELFKAMLLRGRKSQVKVKKPEPVKEEISNNPFAQAFAAAKRKR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcccaactgatcttcatcgataaacgcaatcagccgattaaagaatacatt
gtcgccgtagcggcttccgacggactcgacattaaaggcatccaagtgattgcttccccg
gccaaaggggaaaaagccctgatcagcgcgacgttgcgcattccgcctttggaagatcat
caattcgacaccgccaaaattgtcgacgtcattctcgaccaaatggtggtgggcaatgag
accctcaccgtcaaacagctaattgaaaaagccagtgacgatgaagaggtgcgcaaggca
ttgagcaaatcggtcaagaaactgcgcgtcaaactgaccgacctcatcaacgaattcacc
cgctccgaagtcatcaacctgattcaggagcgccgtaacgacgccctgttcaagctgaaa
gaacatgaccaggccatcaaagggcgcaaagtggtgtgcatcgacatcgaagccaccgac
atttgcaccaaagacaatgccgacatcatccaggtgtccatctgtgacttggacggcaac
gaagtgatgaaccaactgattaacccgggttacgacattccggaaaacgataagcacaac
atctgtaccgagatggttcaggatgcgccttatctgaccgaagcctgggaacagattcat
acggccttggcggaagccgacacggtgctggcgtacagcaccgaatccgacttcgcctat
ctgcagaaaagctcggaaaagaaaatgctgacgttcgagctggactataacgactggctg
gatgtggcggagctgtcgaaagatttggtcggcgcgctgcgctggcaatcggaaaaaatg
tactggttctacaagaccccgaaattgaccgacgcttatgaaaaaatcatgggccagccg
ttcccgggagatgcccacgacgccttggccgatgcccaggcgaccgccgagctgttcaaa
gccatgctgttgcgcggccgtaaatcgcaggtcaaggtcaagaaaccggagccggtcaaa
gaagaaatctccaacaacccgttcgcacaggcctttgccgcagcgaagcgcaaacgttaa
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