Thiohalocapsa sp. PB-PSB1: N838_01560
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Entry
N838_01560 CDS
T07019
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
N838_01560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thip03400
]
N838_01560
Enzymes [BR:
thip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
N838_01560
DNA repair and recombination proteins [BR:
thip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
N838_01560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
Motif
Other DBs
NCBI-ProteinID:
QQO52263
LinkDB
All DBs
Position
349167..349499
Genome browser
AA seq
110 aa
AA seq
DB search
MSKADTKQSPPDPDSAPISDPPGFEQSMKELEALVDRLEQDDLTLEESLAAFERGIKLTR
VCQQALDTAEQRVRILTDQSEHAEPEQYHHDVIPNTASDRSIGKNRNRDE
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagccgataccaaacaatcgcctcccgatcccgacagcgcaccgatctccgac
cccccgggctttgagcaatccatgaaagaactcgaagccctggtcgatcgcctcgaacag
gacgatctaacgctggaggaatccctagccgccttcgagcgtggcatcaaactgacgcgc
gtctgccagcaagccctggacaccgccgagcagcgcgtgcgtattctcaccgatcaatcc
gagcacgccgaacccgagcagtaccatcacgatgtcatccccaacaccgccagcgaccgc
agcatcggtaagaaccgcaaccgagatgaatga
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