Thiohalocapsa sp. PB-PSB1: N838_01650
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Entry
N838_01650 CDS
T07019
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N838_01650 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thip03400
]
N838_01650 (uvrA)
DNA repair and recombination proteins [BR:
thip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N838_01650 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N838_01650 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
nSTAND3
AAA_22
AAA_23
AAA_25
DnaJ_CXXCXGXG
NACHT
cobW
Viral_helicase1
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QQO52278
LinkDB
All DBs
Position
complement(366944..369769)
Genome browser
AA seq
941 aa
AA seq
DB search
MNSIRIRGARTHNLKNIDLDLPRNRLIVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLSVMDKPDVDEIAGLSPAIAIEQKTTSHNPRSTVGTITEVHDYLRLLYARVGTPHC
PEHGEPLEAQTITQMVDQVLALPEGERLMLLAPVVDKRKGEYQQMLAELNAQGFIRARID
GDLYELDDAPKLDLHKKHDIEVVVDRFRVRPDLQLRLAESIETALGLSGGTLRVAWMDHP
QRPALTFSANYACPVCGWSIAELEPRLFSFNNPAGACPSCDGLGIEPYFDPAKVVVQPEA
SLADGAIRGWDQRNRYYHRMLQALAAHAGFDLEQPWRELPESARTLVLYGSGDQRIKLLL
PHERGSGKQRPFEGILPMLQTRYRETDSTAVREELARYLSNHPCPDCGGTRLNQAARHVL
VGGRGLAAVSELPVGESLRWFESLELAGNRAEIGAKIIREIAARLRFLVDVGLDYLTLTR
SAETLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNARLLSTLTRLRDLGNSVI
VVEHDEEAIRAADYVVDLGPGAGAQGGAIVAAGSAEQIAAEPASVTGQYLLGAQRIDIPS
KRHADPNGRLLHIQGASGNNLRDIHVAIPIGAFCVITGVSGSGKSTLINDTLYPAAANRL
NGAARQIAMHRAIDGLEHFDKVIDIDQSPIGRTPRSNPATYTGLFNPIRELFANVPEARS
RGYGPGRFSFNVKGGRCEACKGDGLIRVEMHFLPDVYVQCDACLGRRYNRETLEIRYKGK
TIDQVLALTVDEAREFFAPVPVLRRKLQTLLDVGLGYVKLGQSATTLSGGEAQRIKLSRE
LSKRDTGRTLYILDEPTTGLHFHDVKHLLAVLHRFRDQGNTVIVIEHNLDVVKTADWIID
LGPDGGDKGGQVVATGTPEQIARCAESHTGRFLAPLLERGW
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcattcgcattcgcggcgcccgcacccataacctgaagaacatcgatctcgac
ctgccgcgcaaccggctgatcgtactcaccggattgtccggttcgggcaagtcgtcattg
gcctttgataccatctatgccgagggccagcgtcgctatgtcgagtcgctgtccgcctat
gctcgccagtttctttcggtcatggacaagcccgatgtggacgagattgccgggctgtcg
ccggctatcgccatcgagcagaagaccacctcacacaatccgcgctccaccgtcggcacc
atcaccgaggtgcatgattatctgcgcctgctctacgcccgcgtcggcacgcctcattgc
cccgagcatggcgagccgctggaggcgcagacgatcacccagatggtcgatcaggtgctg
gccttgcccgagggcgagcgtctgatgctgctggcaccggtggtggacaagcgcaaaggc
gagtaccagcagatgcttgccgagctgaacgcccagggcttcatccgcgcgcgcatcgac
ggcgatctctatgaactggatgacgcgcccaagctggatctgcacaagaagcatgatatc
gaggtggtggtcgaccggtttcgggtccgcccagacctgcaattgcgcctggccgagtcc
atcgagacggcgctgggactctccggcggcactctgcgggtcgcctggatggaccacccg
cagcgcccggcgctgaccttctcggccaactatgcctgtccggtctgcggctggagcatc
gccgagctggagccgcggctgttctcgttcaacaacccggccggggcctgcccgagctgc
gatgggctcggcatcgagccctacttcgacccggccaaggtcgttgttcagcccgaggcg
agcctggccgacggcgccatccgcggctgggaccagcgcaatcgctattaccatcggatg
ctgcaggccctggccgcgcacgccggcttcgacttggagcagccctggcgcgagttgccg
gaatcggcccgcacgctggtgctgtacggcagcggcgaccagcggatcaagctgctcctg
ccccacgagcgcggcagcggcaagcagcgcccgttcgagggcatcctgccgatgctccag
acccgctaccgggagaccgactcaacggcagtgcgtgaggagctggcccgctatctgtcc
aaccacccctgtccggactgtggcggcacccggctgaatcaggccgcccgccatgtgctg
gtgggcggtcgtggcctggcagcggtctcggagttgccagtgggcgagtcgttgcgctgg
ttcgagtcgctcgagctggccggcaaccgcgccgagatcggtgccaagattatccgcgag
atcgccgccagactgcgctttctggtcgatgtcggcctggattatctgacgctgacgcgc
agcgccgagaccctgtccggcggcgaagcccagcggattcgcctggccagtcagatcggc
gcaggcctggtcggcgtcatgtacatcctcgacgagccctccattggcctgcaccaacgt
gacaacgcccggctgctgagcacgctgacccggctgcgggatcttggcaacagcgtgatc
gtcgtcgagcacgacgaggaggcgatccgcgccgccgactatgtcgtcgacctgggtccc
ggcgcaggtgcccaaggtggggccatcgtcgctgccggcagcgccgagcagatcgccgcc
gagcctgcctcagtgaccgggcaatatctgctcggcgcgcagcgcatcgacatcccgagc
aaacgccatgccgatccgaacgggcgcttgctgcacattcagggcgccagcggcaacaat
ctgcgcgacatccatgttgccatacccatcggcgccttctgtgtcatcactggcgtttcc
ggctccggcaagtccacgctgatcaacgacaccctttaccccgccgctgccaaccgactg
aatggtgccgcacggcagatcgcaatgcatcgcgccatcgacggcctggagcatttcgac
aaggtcatcgacatcgaccagagccccattggccgcaccccgcgctccaacccggcaact
tacaccggattgttcaaccccatccgcgagctgttcgccaacgtgccggaggcgcgctcg
cgcggctatggccccgggcgcttcagcttcaacgtcaagggcgggcgctgcgaagcctgc
aagggcgacgggctgatccgcgtggagatgcattttctgcccgatgtctacgtccagtgc
gacgcctgcctggggcgccgctacaaccgcgagaccctggagatccgctacaagggcaag
accatcgaccaggtgctggcgctgactgtcgacgaggcgcgcgaattctttgccccggtc
ccggtgctgcgccgcaagctccagaccctgcttgacgttggcctgggctacgttaagctg
ggccaaagcgccaccacgctgtccggcggcgaggcccagcgcatcaagctcagccgcgaa
ctttccaagcgcgacaccggccgcaccctctatatcctggatgagcccactaccggcctg
catttccacgatgtcaagcacctgctcgccgtgctgcaccgcttccgcgatcagggcaac
accgtcatcgtgatcgagcacaacctcgacgtggtcaagaccgccgactggattatcgat
ctcggccccgatggcggcgacaagggcggccaggtcgtcgccaccggcacgccggagcag
attgcgcgctgtgccgagtcgcataccgggcggttcctggcgccgttgctcgagcggggc
tggtga
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