Thiohalocapsa sp. PB-PSB1: N838_02225
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Entry
N838_02225 CDS
T07019
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
N838_02225
Enzymes [BR:
thip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
N838_02225
Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
N838_02225
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QQO52378
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All DBs
Position
complement(523350..524360)
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AA seq
336 aa
AA seq
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MQQPLPSLGLAPLPGALLAILILLLCGCGNAPKQIETGSIDGPPNAVPRVEPKARFGNMK
SYVVYGKTYYPKQSSRGHVERGVASWYGKKFHGRKTSSGERYDMYQMTAAHKTLPLPTYA
LVNNLENGRSVVVKVNDRGPFIGNRIIDLSYAAAKKLGLDKQGTGRVEVISIDPRDHDGK
VPKLHRVAAQRQGSRSRPSWPTSRSVNLASDARIADSAGGRSHLENRPAITSAQPFKPAP
KPAIAQASATTSSAESPLYLQVGAFGTRNNAEQLRRRLKSLLQSPISIRKPDKDSKSAMP
SLYRVRVGPVASRADADAIAHKLTSLGIARPLMIDN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcccctgccatctctcggacttgccccccttccaggggctttgctggcaatc
ctgatcctattgctttgcggctgtggcaatgcgccaaagcagatagaaaccggcagcatt
gacggtccgccgaatgccgtgccgcgagtcgaacccaaggcgcgattcggcaatatgaaa
tcctacgtggtgtatggaaagacctactaccccaaacagagcagccgaggtcatgtggag
cgtggcgttgcatcctggtatggaaaaaaatttcatggccgcaagacgtccagcggcgag
cgctatgatatgtaccagatgacagccgcccacaaaacgctgccgctgcccacctatgcg
ttggtaaacaacttggaaaatggccgcagcgtggttgtcaaggtaaacgatcgtgggcca
ttcatcggcaatcgcatcatcgacctgtcctatgccgcggccaaaaagctcggcctcgac
aaacagggaacggggcgagtggaggtgatctccatcgatccgcgcgatcatgatggtaag
gtgccaaaactgcatcgcgtcgcggcacaacggcaggggtctcgatctcggccgtcgtgg
cctacctcgcgatccgtcaatctcgccagcgatgcacgcatcgctgattctgccggcggc
cgctcgcatctcgaaaaccggccagcaatcaccagcgcacagccgtttaagccagcacca
aaaccagcaatcgcgcaggcatccgccacgacctctagcgcggaatcgccgctctatttg
caggttggggctttcggcacgcgaaataatgcagaacaactgcgccgtcgtctcaagagc
cttttgcagagtccaatctcgattcgcaagccagacaaggactcaaaatccgcgatgccc
agcctgtatagggttcgggtcgggccagtcgcctcgcgtgctgatgccgatgcgattgct
cacaaacttacatccctcggtatcgcccgcccattgatgatcgataactga
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