Thiohalocapsa sp. PB-PSB1: N838_03510
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Entry
N838_03510 CDS
T07019
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
thip02044
]
N838_03510
02035 Bacterial motility proteins [BR:
thip02035
]
N838_03510
Secretion system [BR:
thip02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
N838_03510
Bacterial motility proteins [BR:
thip02035
]
Pilus system
Pilus assembly proteins
N838_03510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
QQO52574
LinkDB
All DBs
Position
complement(829137..832700)
Genome browser
AA seq
1187 aa
AA seq
DB search
MFDNSGSMRNGVPQSKPDYDPNIDWSDRNVYPGAPINFRQDRIYWSFDGTPPIIDTDRYV
PTTSNRCQTSITPLGVTGRYTDFLRVWREGIGIIETESVSECECQYRYYYDNSWRRSYWQ
IGENDCQSRDYWKVSYRWQCTITEKDVYGEIDIWRTVEDNNDTRNTTHLECAADIDNEDP
SNPNTDDGWAVDRNGPFQDNRAGDPWDTWEKRHDSELLRTLFTGNYLAWYYNDDLVENRS
KMEIAQDVVTELVTNNPQIDFGLMLFNYNDGNNRNGGRVVRHLSRMDEDDRNSLVQLIDS
LTPETWTPLCETFYEAYRYIAKPGNNSQTVYFGNDDSSRVPYRDACAEWDNGTSCTLDGT
YNSPMGDCENIYTIVMTDGRPTYDTDANYLARSLPGISSCGRYEFDSNQGTLENCMPMLA
KYMFETDLDGQWENGNQRAVTYTIGFLTDQALLSDTAEFGGGTYYTAYNAHELADAFQAT
LTEILSSNTSFAAPAVAVDAYNRTKSLKAEYIAMFRPMSRPRWPGNLKKLEMRNIGDGFE
VVVDKLGVRAVDPVTGNIKDTATTFWTTLGVDGMEVDEGGAGERLILRDPRTRTLLTNTG
DLNTLETFDTNNDALTEAMFGAADSSTRDRYIDWMRGIDVQDEDSDDDRTDTRPWIIGDV
MHSTPEAINFGNPDDPNSPDVRVVFGTNAGFLHMIESDTGDESWAFFPKELAPIVRILYD
NDPADVHPYGVDGAPAVWIEDQNGDGDIVADDGDRVYLYFGLRRGSVDAERLGGAYFALD
ISDPDQPASLWQIDQTDLPELGQSWSKPAPTRVPGYANPVVIIGAGYDTNKDDLGVGTSD
LAGRGIYVLDALNGSLVWGITPGASSDTNLEETGLQDSVPMPVTTLDSNGDHVTDRIYFA
DTGGNVWRVDLIDDNPNNWSIFKFASLGGNTQANDRRFTDRIDVVITRYSGLSYDALLLG
SGNRAHPLERNVNDRFYMLRDFDTQSLLHVPDDGDPDTNACNNPDLNPDLLPCTEIPPVI
TENELFDATANLIQDGSDDQKTAARAQLASSQTKGWFITLEKTGEKNLSRAITLQGRVFF
TTFVPSDPLDPEFEYVCRPREGTGFLYAVGLHDAIAMYDWSAPFDNALNKTDRSKAIKDH
IPDYPVAYFGDAEIGLVGVGAGTDGSGIERTELSLSPKPVYWMEEED
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgataattccggcagcatgcgcaacggggtgccgcaatccaaaccggattacgac
ccgaatatcgattggagcgaccgtaacgtctatccaggagctccgatcaacttccgacag
gacagaatctattggtcgttcgatggcacaccacccattatcgatacggatcgatacgta
ccgaccacgtccaaccgatgccagacatcaatcacacccctgggggtgaccggccgatat
accgatttcctccgggtttggcgtgaagggatcggtataattgaaacggaatcggtgtcg
gaatgcgaatgtcagtatcgttattattacgataatagttggcgtcggtcatattggcaa
atcggtgaaaacgactgtcaaagtcgcgattattggaaggtcagctacagatggcagtgc
accatcaccgaaaaagatgtgtatggcgaaatcgatatttggcgaactgtcgaggataac
aatgacacccgcaatacaacgcatttggaatgtgccgcagacatcgataatgaagaccca
tccaatccgaataccgacgacggttgggcagtcgaccgaaatgggccattccaggacaat
cgtgcaggcgacccctgggatacctgggaaaagcgacatgatagcgaacttctgcgcacc
ctgtttaccggcaattatcttgcctggtactacaacgatgatcttgtcgagaatcggagc
aaaatggagattgcccaggatgttgtcaccgaattggtcacaaacaatccgcagatcgat
tttggattgatgctgtttaattataatgacggaaataataggaacggcggtcgcgtcgta
cgacatctgtcgcggatggacgaagacgatcgcaacagcctcgtccaactgatcgattct
ctgacacctgagacctggactccgctctgcgaaaccttctatgaagcctatcgttacatt
gctaaacctggaaataattcgcaaacggtctattttggcaacgatgacagcagccgtgtg
ccatatcgggacgcgtgcgcggagtgggataacggtacaagttgcaccctggacggaacc
tataattcgccgatgggagattgcgaaaacatctacaccatcgtcatgacggatggcagg
cccacctatgataccgatgccaattatttggctcgaagcttacccggtatctccagctgt
ggccgatacgaattcgacagcaatcagggcaccttggaaaactgcatgccgatgctggcc
aaatacatgttcgagaccgatctcgatggacagtgggaaaatggaaatcaacgcgcggtt
acctacacgatcggctttttgacggaccaggcactgttgagcgataccgcggagtttggt
ggcggaacctattatactgcctacaatgcccacgagctggccgatgcctttcaggccaca
ttgacggaaatcctgtccagcaacacctcgtttgccgcacccgcggtggccgtggatgcc
tataaccgaaccaagagcttgaaggccgagtacatcgcgatgtttcggcccatgtcgcgc
ccgcgctggccgggaaatctgaaaaaactggaaatgcgcaatattggcgacggcttcgag
gtggtggtggataagctgggtgtgcgggcggtcgacccggtaaccggaaatataaaggat
accgcaaccacattctggaccacactgggcgtagacggcatggaggtcgacgagggcggg
gcgggcgaacgcttgatcctgcgcgacccaagaacccgaacattactgaccaacaccggc
gacctgaataccctggaaacctttgataccaacaacgacgcattgactgaagctatgttc
ggtgccgcggactccagcacccgcgatcgctacatcgactggatgcgagggattgatgta
caggatgaggacagtgatgacgatcgcaccgatacgcgtccctggatcatcggcgatgtg
atgcattcgacccccgaggcaattaatttcggcaatcccgatgatccgaattctcctgat
gttcgcgtcgtctttggcaccaacgccggcttcctgcatatgatcgaaagcgataccggg
gatgaaagctgggcctttttccccaaggaattggccccgatcgtgcgcatcctttacgac
aacgatcccgcggatgtgcatccctacggcgtcgacggagcgccagcggtttggatagaa
gatcaaaacggcgacggcgatatcgttgccgacgacggcgatcgtgtctatctctacttt
ggcttgcgtcgtggaagtgtggatgccgagcggcttgggggcgcctatttcgcgcttgac
atcagcgatccggatcagccagccagtttgtggcagatcgatcaaaccgacttgccggag
cttggccagagctggtccaaaccagcgccgacgcgtgtgcctggatatgccaacccagtg
gttatcatcggcgccggctacgataccaacaaggatgacctgggtgttggcaccagcgac
ctggccggccggggcatctatgtattagacgctcttaatggaagcttggtgtggggtata
acgccgggtgccagcagcgacacgaacctggaggaaaccggtctgcaggactctgttcca
atgccggtgacgacgctcgacagcaatggcgatcatgtgaccgatcgcatctattttgcc
gacaccggggggaacgtttggcgtgtcgatctcatcgatgataatccgaataactggtcg
attttcaaattcgcttccctgggtggcaacacgcaggccaatgaccggcgttttacggat
cggatcgatgttgtcatcaccagatacagcggcctatcttatgacgccctgctgcttggc
agcgggaatcgcgcacacccactggagcggaatgtgaatgaccgtttttacatgctgcgc
gatttcgatacccagagtttgctgcatgtgccggacgatggcgaccctgataccaatgct
tgcaataacccggatctcaatccagatttactgccctgcacggagataccgccggtgatc
accgagaacgaactgttcgatgccaccgcaaatctgattcaggatggcagcgacgatcaa
aaaaccgcggcgcgcgcgcaattggcctcatcgcagaccaagggttggttcatcacgtta
gaaaaaacgggagagaagaacctctcacgtgcgatcacattgcaaggccgtgtgtttttt
accacttttgtgccgtccgatcctctcgacccggaattcgagtatgtatgccgaccgcgg
gagggcacaggcttcctctacgctgttggattgcacgatgcgattgcaatgtatgattgg
tcggcaccctttgataacgccttgaacaagaccgaccgcagcaaagcgatcaaggatcat
atccccgactacccggtagcctactttggcgatgccgagatcggtctggttggcgtcggt
gccggtaccgatggctcgggcattgagcgtaccgaattgtcgctttccccgaagccggtc
tactggatggaggaggaagactaa
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