Thiohalocapsa sp. PB-PSB1: N838_03675
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Entry
N838_03675 CDS
T07019
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
N838_03675 (ltrA)
Enzymes [BR:
thip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
N838_03675 (ltrA)
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Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
HNH_5
Zf-C2H2_ZNF451_6th
Motif
Other DBs
NCBI-ProteinID:
QQO52602
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Position
complement(870009..871700)
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AA seq
563 aa
AA seq
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MTLALATDADSRVTDWHGVDWRRAIRYVRRLQVRIVKAVKEGKWRLVKALQRLLSHSVSG
RLLAVRRVTENRGKKTPGVDGIVWDTPEKKMNAVQRLLQRRYRAAPLRRIYIPKKNGKKR
PLGIPTLFDRAQQALCKLGLEPVAECTGDTNSYGFRPERSAHDAAEQVFNALRLKSSAQW
ILEGDIKACFDEISHNWMLKNIPTQKRTLRKWLKAGYMEKNVFHDTEKGTPQGGIASPLL
ANMCLDGLEACVVNNITEKRQHKVNVVRYADDFIITGDSKEWLEQVAKPRVIRFLVERGL
RLSEEKTHITHVTKGFDFLGWNIRKYPNGKLLIKPSESSIKTLAEKTGEILRNNRQAKTT
NLLKQLNPIIRGWANYHKHAVAKLVFQRVDTFIFKQLWHWAKRRHPRKPSHWVKDQYFKT
VGGNHWVFTGVDDQGDPIRLFKADLVPVTRHVKIQGEANPYDPDWENYFEQRYLQKWKCR
KWGKTKLRSIWKQQGGFCPMCSQGFNGDTSIHTHHIIERCKGGDDNLDNLVLLHPNCHRQ
VHHLMKLGANMQFVFAHSTAGPG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgactttagccttggctactgacgcggattcccgcgtaacagattggcacggcgtcgat
tggcgtcgtgcgatacgttatgtgcgcaggcttcaagtgcgtatcgtgaaggctgtcaaa
gagggcaaatggcgcttggtaaaagccttgcaacgtttgctcagtcactccgtaagcggt
cgcctgctcgctgtcaggcgagtgactgaaaaccgagggaagaagactccgggtgtggac
ggcattgtatgggacacgccggaaaagaagatgaacgcggtacaacggttgctgcaaagg
agatatcgagctgcaccattgcgccggatttatatcccgaaaaagaatggaaagaaacgg
ccacttggcattccaacactgttcgaccgagcacaacaagccttatgtaaattgggtttg
gaaccggttgcggaatgtacaggtgataccaattcttacggctttcgcccggaacgctcc
gcgcatgacgccgcggaacaggtattcaacgcgttaagactcaaatcgtcagcgcaatgg
atactcgaaggagatattaaagcctgtttcgatgaaatcagtcacaactggatgttgaag
aatataccaacgcaaaaacggacgttgaggaaatggctgaaagcgggatacatggagaaa
aacgtctttcatgacacggagaaaggaacgccacaaggtggcatagcttcgccactcttg
gcgaatatgtgtctcgacggactcgaggcttgtgttgtgaacaatataacggaaaagcgc
caacacaaggtgaatgtggttcgatacgctgatgattttatcatcactggcgattccaag
gaatggctggagcaagttgcaaagccacgggtgattcgctttctcgtagaacgtggattg
cgactctccgaggagaagacccatatcacgcatgtcacgaaaggctttgatttccttggg
tggaatatcagaaagtatccaaacggaaaacttctgatcaaaccgtcagagtcgagcatc
aagacgctggcagagaaaacaggggaaatcctccgaaataaccggcaagccaagaccacg
aatctgttgaaacagctcaatccaatcattcggggctgggcgaattatcacaaacacgcg
gtggcaaagctggtgtttcaacgagtggatacgttcatcttcaaacagttatggcactgg
gcaaaaagacgacacccgagaaaaccttcccactgggttaaagatcaatacttcaaaacg
gtgggaggcaatcactgggtgtttacaggtgttgacgatcaaggagatccgatacgtctg
ttcaaggccgatcttgtgcccgtcacaaggcacgtgaaaatccaaggtgaagccaaccct
tatgaccccgattgggaaaactacttcgaacagaggtatctacaaaagtggaaatgccga
aaatgggggaaaaccaagctacggagcatctggaagcaacagggtggtttttgtccgatg
tgtagccaaggcttcaatggtgatacaagtattcatacgcatcacatcatcgaacgctgc
aaagggggagatgataacctggataacctggtcctgctccatcctaactgtcatcgtcag
gttcatcacctgatgaaactcggtgcgaacatgcagttcgtgttcgctcattcgacagcc
ggccctggctaa
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