Thiohalocapsa sp. PB-PSB1: N838_04270
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Entry
N838_04270 CDS
T07019
Name
(GenBank) HAMP domain-containing protein
KO
K13598
two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:
2.7.13.3
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N838_04270
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
thip01001
]
N838_04270
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
thip02022
]
N838_04270
Enzymes [BR:
thip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
N838_04270
Protein kinases [BR:
thip01001
]
Histidine kinases
NtrC family
N838_04270
Two-component system [BR:
thip02022
]
NtrC family
NtrY-NtrX (nitrogen regulation)
N838_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
HisKA
PAS_7
NtrY_N
PAS_9
HATPase_c_5
DUF996
DUF624
Motif
Other DBs
NCBI-ProteinID:
QQO52706
LinkDB
All DBs
Position
complement(1002196..1004409)
Genome browser
AA seq
737 aa
AA seq
DB search
MAAHPLKPLRRWLAHPGAIGVGLLLIALMVALHLMSNAVQNSEFLSRAFVPLLTVVLFGL
FALALMVGVNVIRLVLNYRHQTVGSRLTARVVLLFALIALLPLGVVYYYSLGFLLRGIDS
WFDVEIDSAMEDALKLNRASLDLNQRVLMKYSAQLLAGVEDRSATALTLALDDLRRQAGA
LELTVFEPNGQVIGTAIDDPTQLVPNHPERKVMQGLRLGADYVGLETSEDGELIVRVLVN
DPRSRPLLLQAIFPTSTRISELAAKLEDAYNRYRELSFLRRSLKFSFSLTLSLVLVFGLM
AALLAAFATARRLAAPVADIARGTREVAAGNYEQQLPLPAYDDELAFLVASFNAMTRRIA
QARDHAASSQRVVEEQRSYLETVLGRLSSGVIAFDDALNLGTLNHASRQILRLPDIGDAQ
LSLEALEAAHPRLTHWGETVRRRIKAGQEWREEVTLIGNEGRQVLMCRGSPLPSTGAQSV
GHVVVFDDITKLIRAQRDAAWGEVARRLAHEIKNPLTPIQLSAERLRHKLLPKLQDMDAR
LVDRATHTIVQQVEAMKAMVNDFADYARTPQMQDEPFTLDTLVGEVIELYRASAHQIRLN
LNAPGALVRGDSKRLRQVVHNLIKNASEALEGRRNGCIQVSTRLIQGDDAPAIELSLEDN
GGGIPNELIDRLFEPYVTSKDKGTGLGLSIVKKIIEEHGGIIVADNAEHGARFTARLPVW
RADPPVSEPPPRQIGAS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcatcccctgaaaccattacgccgctggctcgcccatcccggcgccatcggc
gttggactactgctgattgccctgatggttgcattgcacctgatgagcaatgcagtacag
aactcggagttcctgagccgcgcctttgttccgctgctgacggtggtattgtttggccta
tttgcgttggcgctgatggtgggcgtaaatgtgatccggctggtcttgaactatcggcat
caaacagtcggctcgcgactcacggcacgggtggtgctgttgtttgcgctgatcgcactg
ctgccgctgggggtggtttattactactcgctgggctttctgctgcgcggcatcgacagc
tggttcgacgtggaaatcgacagcgccatggaagatgccctaaaactgaaccgggcttcg
ctcgacctgaaccaacgcgtgttgatgaaatacagtgcgcagctgctggctggcgttgag
gatcgctccgccaccgcgctgacactggccctcgacgacttacgccgccaggctggcgca
ttggagctgaccgtgttcgagcccaacggccaagtcatcggcaccgccattgatgatccg
acgcaactggtgcccaatcatcccgagcgcaaagtcatgcaggggctgcgcctgggtgct
gactatgtgggcctggaaaccagcgaggatggtgaactgatcgtgcgcgtattggtaaac
gacccgcgttcgcgacctttgctgctgcaggcgattttcccaacttcgacacgtatcagc
gaactcgccgcaaagctcgaggacgcctacaaccgctacagggagctttctttcctgcgc
cgatccttgaaattcagcttctcgctgacattgtcgctggtactggtgttcggactcatg
gcggcactgctcgcagcattcgccaccgcacgccgtctggctgcgccagtggcggatatt
gcacgcggtacccgagaagtggccgccggaaattacgagcagcaactcccgctgccggcg
tatgacgacgagctggcatttctggtcgcctcgttcaacgctatgactcgtcgcattgcc
caggcgcgagatcatgctgcaagcagccagcgggtggtagaggaacagcgcagttacctg
gaaaccgtgctgggccgactctccagcggtgtgatcgccttcgatgatgcacttaatctg
ggtacccttaaccacgcatcacgccagatcctgcgcctgcccgacattggcgacgcgcaa
ctctcgctggaggcgctggaggcggcccatccaagactcactcactggggcgagacggtg
cgtcgacgaatcaaggccggtcaggaatggcgagaggaggtgacactgatcggcaatgaa
ggtcgccaggtgctgatgtgccgagggagtccactgcccagcaccggtgctcaatcggtc
ggccatgtggtagtgttcgacgacatcaccaagctcatccgtgcccagcgagacgcggct
tggggagaggttgcacgccgcctggcacatgagatcaagaatccgctaacgcctatccaa
ttgtccgcagagcggttgcgccataaactcttgcccaagcttcaggacatggatgcgcgt
ctggtcgatcgcgcgactcacaccatcgtgcagcaggtggaagcgatgaaggcgatggtc
aatgacttcgccgattatgcgcgcacaccgcagatgcaagacgaacctttcacgctggat
acactggtcggcgaggtcatcgaactgtaccgcgccagcgcccatcaaatcaggctgaat
ctcaatgcacctggcgccttggtgcgcggtgattcaaagcgcctgcgtcaggtggtacac
aatttgatcaagaatgcgagcgaggcgttggagggacggcgcaacggctgcatacaggtg
agtacgaggctgatccaaggcgatgatgcaccggcaatcgaactcagtctggaagataat
ggcggcggcattcctaacgagttgatcgatcggctgtttgaaccctatgtaacctcgaag
gacaaaggcaccggcctaggattgtccatcgtcaagaagattattgaagagcacggcggt
atcatcgtcgcggacaatgcggaacatggcgcgcgctttacggcacgattgccagtttgg
cgcgcagatccgcccgtatctgaaccgccgccccggcaaataggagcatcatga
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