Thiohalocapsa sp. PB-PSB1: N838_05260
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Entry
N838_05260 CDS
T07019
Symbol
scpA
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00280
Valine, leucine and isoleucine degradation
thip00630
Glyoxylate and dicarboxylate metabolism
thip00640
Propanoate metabolism
thip00720
Other carbon fixation pathways
thip01100
Metabolic pathways
thip01120
Microbial metabolism in diverse environments
thip01200
Carbon metabolism
thip04980
Cobalamin transport and metabolism
Module
thip_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N838_05260 (scpA)
00640 Propanoate metabolism
N838_05260 (scpA)
09102 Energy metabolism
00720 Other carbon fixation pathways
N838_05260 (scpA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
N838_05260 (scpA)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
N838_05260 (scpA)
Enzymes [BR:
thip01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
N838_05260 (scpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
Ca_hom_mod
DUF3606
Aldolase
Motif
Other DBs
NCBI-ProteinID:
QQO52866
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All DBs
Position
complement(1215751..1217964)
Genome browser
AA seq
737 aa
AA seq
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MSIIPNFSEIDLETQDSSPSGGNGSATWAQRFQAETGKKPEEFSWTTPEQLEVKPLYSAE
DLEGLDHLDTMAGIPPYVRGPYSTMYVTRPWTIRQYAGFSTAKDSNAFYRRNLAAGQKGL
SVAFDLATHRGYDSDNPRVAGDVGMAGVAIDSIMDMRVLFDKIPLDEMTVSMTMNGAVLP
IMANYIVAAEEQGVKPEQLAGTIQNDILKEFMVRNTYIYPPEPSMRIISDIFAYTSKNMP
KFNSISISGYHMQEAGATADLEMAYTLADGVEYARAGLKAGLTIDQFAPRLSFFWAIGMN
FYMEIAKMRAARMLWAKLIKQFNPQSNKSLALRTHSQTSGWSLTAQDVYNNVVRTCIEAM
ASTQGHTQSLHTNSFDEALALPTDFSARIARNTQLFLQQESNTNQVIDPWGGSYYVERLT
RMLAEKAWSHIQEVEETGGMAKAIEAGIPKLRIEEAAARTQARIDSGRQTVVGVNKFILD
QAENIDVLKVENAQVRRQQIAQLEQLRRERNAKEAEEKLQALTKAAETNQGNLLELAVEA
ARAKCSVGEISDAVEKVVGRHKAEIRKISGVYRSEVGETSDMIDTLKKKVEAFEQNDGRR
PRILIAKMGQDGHDRGQKVIASAFADLGFDVDIGPLFQTPAEVARQAVENDVHIVGASSL
AAGHLTLVPELKSELAKLDRPDILVVVGGVIPPQDYDALYKAGAEAIFPPGTVLGKAASS
LIDKLNLTLGYAPSEAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcattcccaatttttccgagatcgacctggaaacccaggattcgtcgccaagc
ggtggcaacggcagtgcaacctgggcgcaacgcttccaagcagagacgggcaagaaaccg
gaggagttctcgtggacgacgccagaacagctggaggtgaagccgctgtattcagctgag
gatctggagggtcttgatcacctcgataccatggcagggattccaccctatgtccgcggt
ccgtattcaaccatgtatgtgactcggccatggacgatccggcaatatgccgggttttcg
acggcaaaggactcgaatgcgttttaccgtcggaatctggcggcagggcaaaaaggtctg
tcggtggcgttcgacctggcgacccaccgcggttacgattccgacaacccgcgggttgct
ggcgacgttggcatggctggcgtcgccattgattcgatcatggacatgcgggtgctcttc
gataagattccgctcgatgagatgactgtttcgatgacgatgaacggagccgtgctgccg
atcatggctaattacatcgtcgcggcggaagagcagggggtcaagcccgaacagctcgct
gggaccattcagaacgatatcctcaaggaattcatggtccgcaacacctacatctacccc
ccagagccgtcgatgcggatcatctccgacatcttcgcctacacatcgaagaatatgccc
aagttcaactcgatctccatctcgggttaccacatgcaggaagccggggcaacagcggac
ttggaaatggcctacacattagccgatggcgtggagtacgcacgcgcgggattgaaggct
ggtctcaccatcgatcagtttgcccctagattgtcgttcttctgggcaatcggcatgaat
ttctatatggaaattgccaaaatgcgtgccgcccgcatgctttgggcaaagctgatcaag
caattcaatccgcagagcaataagtcccttgcgttgagaacccactcgcagacatccgga
tggagtctgacggcacaggatgtctacaacaacgtggtgcgcacctgtatcgaagcgatg
gcttcaacgcagggccacacgcagtctctgcataccaactcgttcgacgaagccttggcc
ctgccaacggacttctcggcgcgtatcgcccgcaacacgcagcttttcctgcaacaggaa
agcaatacgaaccaagtgatcgatccttggggcgggagctactacgtggagcgcttgacc
cgcatgctggcagagaaagcctggtcacacatccaggaagtggaagaaaccggcggcatg
gcgaaagccattgaagccggcatcccgaagttgcgcatcgaggaagcggctgctcgcacc
caagcgcgcatcgattccggtcgccaaaccgtggttggcgtcaacaagttcatcctcgat
caggccgaaaacattgatgttctgaaggtcgagaatgcgcaggtccgccgtcaacaaatc
gctcagctcgaacaattgcgtcgtgagcgcaacgccaaggaggccgaggagaaattgcag
gcgctgaccaaagcggcagaaaccaaccagggaaatctattagaactggccgtggaggcc
gcgcgcgcaaaatgctcggttggtgaaatctcagatgcggtcgagaaagtcgtcggtcgg
cacaaggccgaaattcgcaagatttctggagtctatcgcagtgaagtcggggaaacgtcc
gatatgatcgacacactgaagaaaaaagtcgaagcctttgagcaaaacgacgggcggcgc
ccgcgtattctgatcgctaagatgggccaagatggacatgaccgcggacaaaaagtgatc
gccagtgccttcgccgatctcggattcgacgtcgatattggccctcttttccaaacgccg
gcagaagtcgcccggcaagcggtcgagaacgatgtacacattgtcggcgccagctcgctg
gctgccgggcatctgaccttggttccggaactcaagtccgaattggccaagctggatcgc
ccggatattctggttgtcgtcggcggggtaatcccgccgcaagactatgacgcgctgtac
aaggcaggtgctgaggcgatcttccctccgggaactgtgctcggcaaagcagcctcctct
ctgatcgacaagctgaacctgaccttgggttacgctccaagcgaggcagcgtaa
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