Thiohalocapsa sp. PB-PSB1: N838_06880
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Entry
N838_06880 CDS
T07019
Name
(GenBank) efflux RND transporter permease subunit
Organism
thip
Thiohalocapsa sp. PB-PSB1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QQO53126
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All DBs
Position
complement(1615812..1618859)
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AA seq
1015 aa
AA seq
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MNFAAATLDKRTIAWLGCILLLVGGWISYQQLGRFEDPEFVIREAVISTPYPGALPTQVA
EEVTDVIEGAMQQLQEVKEITSVSGMGLSRVKVEIDLPFARDRDQLEQVWDKLRRKVADA
QRELPPGAGPPVVNDDFGDVYALFFAVTGDGYSLEQVRDYVEVLERELVLVPGVARVATL
GAPQDAIYVELAASRAAQLGITLAQIDEALRRQNLISAAGDLIAGPQRIRISPQGQVDSV
AAIGNIVLGAGGEQVIFLKDVADIGRGLVEPPQALVRYDGRPAIGLGVSNVAGGNVVEMG
DAVRARLAALESQRPVGMELNVISYQSDSVRAAVDGFVWNLVAAVVIVVGVLVLFMGLRS
ALVVGIVLVLTVAGTLIAMNLDGIAMQRISLGALIIALGMLVDNAIVVTDGILVRLQRGE
DRRQAAIDVVQATQWPLLGGTAVGILAFSAIGLSPTDMGEYAGSLFWVILYSMLLSWVLA
VTITPLLCVVLLKVKLAAEADGTRQPVLDRYRTLLRTLLRHRLGTGLALLALLAAGVVGF
GFVTPGFMPESARPQFVVDIYLPQGTDIDITAAELAEIEQTVRTKPGVTHAASFVGQGGL
RFMLTYSPEEPNSAYGQLLVDVDDFRRIDPLVAELQQELTAAHPDAAIKVWKFMLGRGGG
KKIEAAFRGPDPAVLRRLADKAKGIMAADPGAVAVQDDWREKVPVLRPDVDPVAAQRAGV
DITQVSAALNRVFSGERVGAYREGDTLVPIIARAPQAERDRAAALDNVQVYSPTAGRYVP
VGQLVTATELQWVDAIVRREDRFPTIKAQADPEPGALSGPVLERLKPKVESIALPPGYTL
EWHGEYKASREANAGLAVSAPYGFAAMVLAVVVMFNAVRQPLVIWLTVPLAIVGVAIGLL
LFQVPFEFMAILGFLSLIGMLVKNAIVLVDQADAERRAGKPGLAPVLDAAASRARPVVLG
ALTTILGVAPLLFDPFFKSMAVTIMFGLAFATLLTLIVVPLLYAVLFRIRDHATT
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgccgccgcgacactcgacaagcgcaccatcgcctggctcggctgcatcctg
ctgctggtgggtggctggatcagctaccagcagctcggtcgcttcgaggacccggagttc
gtcatccgcgaggccgtgatctccacgccctatcccggcgcgctgccgacgcaggtggcc
gaggaggtcacggacgtcatcgagggcgccatgcagcagctccaggaggtcaaggagatc
acctccgtgtccggcatgggcctgtcgcgggtgaaggtggagatcgacctgcccttcgcg
cgtgaccgcgatcagttggagcaggtctgggacaagctccggcgcaaggtcgcggacgcc
cagcgcgagcttccgccgggcgccgggccgcctgtggtcaatgacgacttcggcgatgtc
tacgcgctcttcttcgccgtcaccggcgacggttactcgctggagcaggtccgcgactac
gtggaggtgctggagcgcgagttggtgctggtgccgggcgtggcccgggtcgcgaccctt
ggcgcgccccaggacgccatctatgtcgagctcgccgcatccagggccgcgcagctcggc
atcaccctggcacagatcgacgaggccctgcgccggcagaacctgatctccgctgccggc
gacctgatcgccggcccgcagcgcatccgcatctccccgcaggggcaggtcgactccgtc
gcagccatcggcaacatcgtgctcggcgccggcggcgagcaggtaatcttcctgaaggac
gtggccgatatcggccgcggcctcgtcgagccgccgcaggcgctggtgcgctacgacggc
cggccggccatcggccttggcgtatccaacgtcgccggcggcaatgtggtggagatgggc
gatgcggtgcgcgcgcggctcgcggcgctggagtcccagcggccggtgggcatggagctc
aatgtcatctcctatcagtcggactcggtgcgggcggcggtggacggcttcgtctggaac
ctggtcgccgccgtggtcatcgtggtcggcgtgctagtgctcttcatggggctgcgcagc
gccctggtggtgggcatcgtgctggtgctcacggtggccgggaccctgatcgcgatgaac
ctcgacggcatcgccatgcagcgcatctctctgggcgcgctgatcatcgcgttgggcatg
ctggtggacaacgccatcgtcgtcaccgacggcatcctggtgcgcctgcaacggggtgag
gaccggcgacaggcagccatcgacgtggtccaggcgacgcagtggccactcctcggcggc
accgccgtgggcatcctggccttcagcgccattgggctgtcgccgacggacatgggcgag
tatgcgggatcgctgttctgggtgatcctgtactccatgctgctgagctgggtgctggcg
gtgaccatcacgccgctgctctgcgtcgtcttgctcaaggtgaagctggcggcagaggcc
gacggcacccggcaaccggtgctggaccgctaccggaccctactgcgcacgctgctgcgg
catcggctcggcaccgggctcgcgctgctcgcgctcctggcggcgggcgtcgtgggcttc
ggctttgtgacgcccggcttcatgccggaatcggcgcgtccgcagttcgtcgtggacata
tacctgccccagggtacggacatcgacatcaccgcggcggagctcgccgagatcgagcag
accgtccgcaccaagcccggcgtcacccatgccgccagcttcgtcggccagggcggcctg
cgcttcatgttgacctattcaccggaggagccgaacagcgcctacggacaactgctggtg
gacgtggacgacttccggcgcatcgacccgctggttgctgagctgcagcaggaattgacc
gccgcgcacccggacgccgccatcaaggtctggaagttcatgctcgggcgcggcggcggc
aagaagatcgaggccgccttccgcggaccggacccggccgtgctgcgccggctcgccgac
aaggccaagggcatcatggccgcggaccccggcgccgtcgcggtgcaggacgactggcgc
gagaaggtccctgtgctgcgcccggacgtggacccggtggcggcccagcgcgccggtgtc
gacatcacgcaggtcagcgccgcgctgaaccgcgtcttcagcggcgagcgcgtcggcgcc
tatcgcgagggcgacaccctggtgcccatcatcgcgcgggcgccgcaggcagagcgggac
cgggccgcggcgctggacaatgtccaggtctacagccccaccgccgggcgctatgtgccg
gtgggccagttggtgacggcgaccgagcttcaatgggtggacgccattgtccggcgcgag
gaccgcttcccgaccatcaaggcgcaggcggacccggaacccggcgcgctgtccggaccg
gtgctggagcggctcaagcccaaggtcgagtccattgcgctgccgcccggctatacgctg
gaatggcacggcgaatacaaggcctcccgcgaggccaatgccggactcgcggtctccgcc
ccctacggcttcgcggcgatggtgctcgccgtggtggtgatgttcaacgccgtgcgccag
ccactggtgatctggctcacggtgccgctcgccatcgtcggcgtggccattgggctgctc
ctgttccaggtgcccttcgagttcatggccatcctgggtttcttaagcttgatcggcatg
ctagtcaagaacgccatcgtgctggtggaccaggccgacgccgagcgcagggccggcaag
ccgggcctggcgccggtgctggatgccgccgccagccgcgctcgcccggtggtgctgggc
gcgctcaccaccatcctcggcgtcgcgccgcttctgttcgaccccttcttcaagagcatg
gcggtgaccatcatgttcggcctcgccttcgcgacgctcttgacgctcatcgtcgtgccc
ctgctctatgccgtgctgttccggattcgagaccatgcgactacctga
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