Thiohalocapsa sp. PB-PSB1: N838_07895 Help Entry N838_07895        CDS       T07019                                  Symbol uvrA Name (GenBank) excinuclease ABC subunit UvrA   KO K03701   excinuclease ABC subunit A Organism thip  Thiohalocapsa sp. PB-PSB1 Pathway thip03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:thip00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     N838_07895 (uvrA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:thip03400]     N838_07895 (uvrA) DNA repair and recombination proteins [BR:thip03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      N838_07895 (uvrA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       N838_07895 (uvrA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter AAA_16 SMC_N AAA_29 nSTAND1 AAA_22 AAA_21 AAA_33 AAA_18 AAA_25 RsgA_GTPase NACHT Viral_helicase1 nSTAND3 ATPase UvrA_DNA-bind SLFN-g3_helicase nSTAND_NTPase5 DnaJ_CXXCXGXG MeaB cobW FtsK_SpoIIIE CobU YmcF-like Motif Other DBs NCBI-ProteinID:  QQO53300 LinkDB All DBs Position complement(1892169..1898000) Genome browser AA seq 1943 aa AA seqDB search MPESDDCIRLRGVRQNNLKHLDLDLPLGKLIVVTGVSGSGKSSLAFDTLYAEGQRRYVET FSPYARQFLERMDRPRAERIDGIPPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFARAA RLFCHGCGREVRRDTPQSIWGALLHRHGNEQPRLLICFELAVPESMHLEQLKELLGQQGY IRFRSETAERLEVIQDRLQLTPDNQSRALEALEAALDHGHGHLRIYPLDADRNPGPPWHF SSHLHCPDCDLHYREPTQNLFSFNSPMGACDACRGFGRSIGIDWSLVVPDQSKSLLDGAV KPIQSDSYSEVQEDLIGFAQRRGVPTDVPWHALSDADRAWVIDGEGEWEGPDRKQQVWYG IRRFFHWLEGRNYKMHVRVLLSRYRSYDLCPACHGARLADEALDWRIGTHELADAALPRD KRFRHARTAMSQTAWYGLPGLGLHDLMRLPIDRCHAFFDRLRLSSSQMDQAMDLLLANIR ARLHYLVQVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDM DRVVAILQRLRDQGNSLLVVEHDPQVIRAADQIIDIGPQAGERGGELMFQGTPAELLHRD DSLTGAYLAGRKRIEPPRPPRPPVAGEPMLSIRGAREHNLQGVDVDIPLHRLVVVTGVSG SGKSTLVQDLLFNHLAKRKGHPAGTPGDCDGIHGAEAISDLLLLDQSPIGRTSRSNPASF VGALDPIRKLFAATALAQERGYKAGHFSFNSGPGRCPTCAGSGFEHVEMQFLSDVYLRCP DCNGSRYKASLLEVRLAQIPGADGAGASIADVLDMTVAEALAAFAEQTDVQRALAPLVDL GLDYLRLGQPVPTLSGGEAQRLKLAGQLAKSAKSLGRRRRPGLLFLLDEPTTGLHFDDVA TLLKAFRRLLDAGHSLLVIEHNLDLMRAADWLIDLGPEGGDGGGQLVCTGTPQQVAAHGR GHTADALRKDMAMADMRASGQPKQPDQPSQLDQPSQPDQPDRPGARHAERPIAAARPAAG VEGYPQHPAPAAAVNLAETAATYARHAPAAAAQPDSPDSPSASIVIRHAREHNLKDLTLS IPRGQFIVITGVSGSGKSTLAFDILFAEGQRRYLESLNAYARQFVQPAARADVDAIFGIP PTVAIEQRTSRGGRKSTVGTLTEVHHFLRLLYVKLGTQYCPDCDLAIAPMDRDRLLQRLL TEHRGRTLILLAPLIIARKGYYNELAAWAARNGHSLLYVDGQPTSTNAWPRLDRFREHTI DLPLGDIQVHDANAARLGLLLDRALELGKGLIRVRVRAAAAPADAAGDRNALAETDSIDY STSRTCPGCGKGFEEPDPRWFSYNSKHGWCPDCFGTGLKLDGFDAQQSGEETCWLEAPVE TQDNCPRCNGQRLRREALAVRFRDLSIAQVSALSVVDAARWFDTLASDQQLNQRETAIGQ DLFAEVRGRLKFLQQVGLGYLSLDRAAPTLSGGEAQRIRIAAQLGSNLRGVCYVLDEPSI GLHQRDTAMLIDTLTGLRDQGNTVIVVEHDANSMRHADQIIDLGPGAGVQGGTLVARGTA SELAAHPHSITGRFLARRTPAPEAAEQPRQQAIAAAGALSIQAATANNLQQLDVSVPLAR LVCVTGVSGSGKSTLVREVIARSLSKLLAAQRPQRSRAARVGELHGCRALTGWQHLSRIL EVDQTPIGKTPRSCPATYIGFWNRIRQLFAAVPQARMLGWGAGRFSFNTRGGRCDACAGQ GVQRLEMSFLPDVELPCEVCHGSRFNAETRTIHYRGHDIGEVLAMSVDQARDLFHAHPAV RHPLELLQAIGLGYLTLGQASPTLSGGEAQRIKLVSELAKARTGADGRTDRPTLYVLDEP TVGLHMADVERLIGLLHRLVHAGHSLLVIEHDLDLIAAADWVIDLGPEGGADGGRVVAQG PPAQIAAAGIGHTAAALRERFAG NT seq 5832 nt NT seq  +upstreamnt  +downstreamnt atgcccgagtccgacgactgcatccgcctgcgcggcgtgcgtcaaaataatctgaaacat ctggatctggatctgccgctgggcaaattgatcgtggtcaccggcgtgtcgggttccggc aagtcctccctggccttcgataccctgtatgcagagggccagcggcgctatgtggagacc ttctcgccctatgcgcgacagtttctggagcgcatggacagaccgcgggcagagcgcatc gacggcattccaccggccattgccatcgaccagaccaatccggtgcgcacctcgcgctcc acggtcggcaccatgaccgagctcaacgaccacctgaaactgctgttcgcccgcgccgcc cgcttgttctgccacggctgcgggcgcgaggtgcggcgcgataccccgcagagcatctgg ggcgcattgctgcaccgccatggcaatgagcagccgcggctgctgatctgtttcgagctg gcggtgccggaatccatgcacctggagcagctcaaagagttgctcggacagcagggctac atccgctttcgatccgagaccgccgagcggctcgaggtgatccaggaccggttgcagctg actccggataaccagagccgtgcattggaagccctggaagcggcgctcgatcacggccat ggacacctgcgcatctacccgctggatgcggatcgcaatcccggcccgccctggcacttt tcgtcgcacctgcattgtccggactgcgacctccactaccgcgaaccgacccagaatctg ttctccttcaactcgccgatgggggcctgcgatgcctgtcgcggttttggacgcagcatc ggtatcgattggtcgctggtggtgccggatcagagcaaatccctgctcgatggcgccgtc aagccgatccagtccgacagctactccgaggtgcaggaagatctgatcggctttgcccag cggcgcggcgtgccgacggatgtgccttggcacgctttatcggatgcggaccgcgcctgg gtgatcgacggcgagggcgaatgggaaggaccggatcggaagcagcaggtctggtatggc atacgccgcttttttcactggctggagggacgaaattacaaaatgcatgtgcgtgtgctg ctatcgcgctatcgcagctacgacctctgccctgcttgccatggcgccaggctcgcggac gaggcactggactggcgcatcggcacccatgagctggcggacgccgcattgccccgagac aagcgctttcggcacgcgcgcacggccatgtcccaaaccgcctggtatggcctgccgggg ctcggcctgcatgatctgatgcgcttgcccatcgatcgctgtcatgcttttttcgatcgg ctcagactgtccagtagccagatggaccaggcgatggatctgttgctggccaacatccgc gcgcgcctgcactatctggtgcaggtcggactgggatatttgaccctggaccgccaatcc cgcaccctgtccggcggcgaggtgcagcgcatcaatctgaccacggcgctcggcacctcg ctggtgaataccctgttcgtgttggacgagcccagcattgggctgcatccgcgcgatatg gaccgggtcgtggccatcctgcagcgtctgcgggatcagggcaattcgctgctggtggtg gagcatgacccgcaggtgatccgcgcggcggaccagatcatcgacatcggcccgcaagcc ggcgaacgcggcggcgagttgatgttccagggcacgccggccgaattgctgcaccgcgac gactcgctgaccggcgcctatttggccggtcgcaagcgcatcgagccgccgcgcccgccc aggccgccggtcgccggcgagcccatgctgagcatccgtggcgcccgcgagcacaacctg cagggcgtggatgtggacatcccgttgcatcgcctggtggtggtgaccggtgtctccggg tccggcaaatcgacattggtgcaggatctgctgttcaaccatctggccaagcgcaaaggg catccggcgggcaccccaggtgattgcgacggcatccacggggccgaagcaatcagcgat ctgttgctgctggatcaatccccgatcggtcgcacatcgcgttccaatccggccagcttt gtcggcgcgctggacccgatccgcaaactgtttgccgccaccgcgctggcccaggagcgc ggctacaaggccggccacttcagcttcaactccggccccggacgttgcccgacctgtgcc ggttccggcttcgagcatgtcgagatgcagttcctgtcggatgtctatctgcgctgtccg gactgcaacggcagccgctacaaggcctcgctgctggaggtgcgcctggcgcagatccca ggtgcggatggcgctggcgccagtatcgccgatgtgctggacatgaccgttgccgaggcg ctggccgcctttgcggagcagaccgatgtgcagcgcgcactggcaccgctggtggatctg gggctggactatctgcgcctgggccagccggtgccgaccctgtccggcggcgaggcgcag cgcttgaagttggccgggcaactggccaaatccgccaaatccttgggccggcgccgccgg ccggggctgttgttcctgctcgacgagcccaccaccgggctgcacttcgacgacgtcgca accctgctcaaggcattccgacggctgctggatgccggacactcgctgctggtcatcgaa cacaatctggacctgatgcgtgccgcggactggctcatcgacctgggtccggagggcggc gatggcggcgggcagttggtctgcaccggcactccgcagcaggtcgccgcgcacgggcga ggccacaccgcggacgcgctgcgaaaggacatggcgatggccgacatgcgggcatccggt cagcccaagcagcccgatcagcccagccagctcgatcagcccagccagcccgatcagccg gatcgaccgggcgcgcgccatgcagagaggccgattgccgcggcacggcccgccgccggg gtcgagggataccctcagcacccggcaccggctgccgcggtcaacctggccgaaaccgcc gcgacctacgcccgacacgcgccggccgctgccgcgcagcccgactcgccggattcgcca agcgcgtcgattgtcatccggcatgcccgcgaacacaacctgaaagacctcaccctgtcg attccacgcgggcagttcatcgtcatcaccggggtctccggcagcggcaagagcacattg gccttcgacatcctgttcgcggaaggccagcggcgctatctggaatcgctgaatgcctat gcgcgccagttcgtgcagccggcggcacgcgcggatgtggacgccatcttcggcatcccg ccgaccgtggccatcgagcagcgcaccagccgcggcgggcgcaagagcacggtgggtaca ttgaccgaggtgcatcactttttgcgcctgctgtacgtcaagctgggcactcaatattgc cccgactgcgatcttgcgattgcacccatggatcgggatcggctcctgcaacgactgcta acggagcacaggggtcgcaccctgattttgctggcgccgctgatcatcgcccgcaagggc tattacaacgagctggcggcctgggccgcgcgcaacggacactcgttgctgtatgtggat ggacagcccacatccaccaacgcctggccgcgcctggatcgcttccgcgagcacaccatc gatctgccgctgggtgacatccaagtgcacgacgccaacgcagcgcgcctcggactgctg ttggatcgtgccctggagctgggcaagggattgatacgggtgcgggtgcgggcggccgca gcgccagccgatgcagccggcgatcgcaacgcgcttgccgaaaccgacagcatcgactat tccaccagccgcacctgccccggctgcggcaagggcttcgaagagccggacccgcgttgg ttctcgtacaactccaagcatggctggtgcccagattgcttcgggaccgggctgaaactg gacggattcgatgcgcaacaaagcggcgaggaaacatgctggctggaggcgccggtcgag acccaggacaactgcccgaggtgcaacggacagcggctcaggcgcgaagccctggcggtg cgctttcgcgacctgtccatcgcccaggtatcggcattgagcgtggtcgatgccgcgcgc tggttcgatacccttgcatcggaccagcaactgaaccagcgcgagacggcgatcggtcag gatctgtttgccgaagtgcgcggacggctgaagttcttgcaacaagtgggtctgggctat ttgagcctggaccgcgccgcgccgacattgtccggcggcgaggcacagcgcatccgcatt gcggcgcaactcggttccaatctgcgcggggtctgctatgtgttggacgagccgagcatc ggcctgcatcaacgtgacactgccatgctgatcgataccctgaccgggctgcgcgaccag ggcaacacggtcatcgtcgtcgagcacgacgcgaacagcatgcgccatgccgaccagatc atcgatcttgggccgggcgccggcgtgcagggcggcaccctggtcgcacgcggcacggcg tccgaactggccgcgcatccgcattccatcaccgggcgcttcctggcccgccgaacacct gcaccggaggccgccgagcaaccccggcaacaggccatcgcggctgccggggccttatcg atccaggcggcgacagccaataatctacaacaactcgatgtctctgtgccgctggcacgg ctggtgtgcgtcaccggcgtatccggctccggtaaatccaccctggtccgcgaggtcatc gcgcgttccctgagcaaactgctggccgcgcagcgcccgcaacgcagccgcgcagcgcgc gtcggcgagctgcacggttgccgcgcgctgaccggctggcagcacctgagtcggatactg gaagtggaccaaaccccgatcggcaaaacaccgcgctcctgcccggcgacctacatcggc ttttggaaccgcatccggcaattattcgcggcagtaccgcaggcgcgcatgctcggctgg ggagccggtcgcttctccttcaacacccgcggcgggcgctgcgatgcctgtgccggccag ggcgtacagcgtctggaaatgagctttttgccggatgtggagttgccctgcgaagtctgc catggcagtcgcttcaatgccgaaacccgcaccatccattatcgcggccatgacatcggc gaggtgctggcgatgagcgtggaccaagcgcgcgacctgttccatgcgcaccctgcggtg cgccatccgctggaattgctgcaagcgatcgggctgggctatctgaccctgggccaggcc agcccgacgctgtccggcggcgaagcgcagcgcatcaagctggtcagcgaattggccaag gcgcgcaccggcgcggacgggcgcaccgaccgccctaccctctatgtactggacgagccg acggtgggcctgcacatggcggatgtggagcggctgatcggcctgctgcatcgtctggta catgccggacactcgctgctggtcatcgaacacgacctcgacctgatcgccgccgctgac tgggtcatcgatctcggccccgaaggtggcgccgacggcggccgagttgtcgcccagggc ccacctgcccagatcgcagctgccggcattggccacaccgccgcggccctgcgcgaacgc tttgccggctga

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