Thiohalocapsa sp. PB-PSB1: N838_08060
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Entry
N838_08060 CDS
T07019
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N838_08060 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thip03400
]
N838_08060 (uvrB)
DNA repair and recombination proteins [BR:
thip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N838_08060 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N838_08060 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
UB2H
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QQO53328
LinkDB
All DBs
Position
complement(1936869..1938875)
Genome browser
AA seq
668 aa
AA seq
DB search
MTKSFELVCSFQPAGDQPEAILRLVEGLQDGEAGLTLLGVTGSGKTFTIANVIERLQRPT
LLLAPNKTLAAQLYGEMREFFPHNAVEYFVSYYDYYQPEAYVPASDTYIEKDASINEHIE
QMRLSATKGLLERPDVILVATVSSIYGLGDPEAYLKMVLHLSRGDLIDQRAMLRQLAALQ
YRRNEVELSRGSYRVRGDVIDIYPAESDDEAVRVELFDDEIEALSLFDPLTGEVRRKVPR
YTVFPKTHYATPREVVLNAVEQIKDELRERLGWLRDNNKLVEAQRLEQRTLFDLEMMLEV
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPANALLVIDESHVTVPQLGGMYRGDRSRKEN
LVEYGFRLPSALDNRPMRFDEFEAKQPQVIYVSATPRDYESRRSGAVVEQMVRPTGLVDP
EVEVRPAASQVDDLLSEIRQRVAVGGRVLATTLTKRMAEDLTDYLGEHGVRVRYLHSDID
TVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSEGSLIQTIGR
AARNADGKAILYAERITGSMRRAIDETERRRTRQMEYNQTHGITPRTIQKAVADILEAHT
PGAPMKARDYAKVAEEMAEYGRLTPAQMSKKVKALEKEMHKAARDLEFERAAAIRDQIKD
LRERGLAI
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcgtttgaactcgtttgttcctttcagcccgccggtgaccagccggaggcg
attttgcgtctcgtggagggcctgcaggacggcgaagcgggtctgaccctgcttggggtg
accggttccggcaaaaccttcaccatcgccaatgtcatcgagcggcttcagcgccctacc
ctgctactggcaccgaataagacgttggccgcacagttgtatggcgagatgcgcgagttc
tttcctcacaacgccgtcgagtactttgtttcctattacgattactatcagccggaggcc
tatgtgccggcctccgatacctacatcgagaaagatgcttcgatcaacgagcacatcgag
cagatgcgtctgtccgccaccaaggggctgttggagcgaccggatgtcattctggtggca
actgtttccagcatctatggccttggcgatcccgaggcgtatctaaaaatggtcttgcat
ctttcccgaggcgatctgatcgatcagcgcgccatgttgcgccagcttgcagccttgcaa
taccggcgcaacgaggtcgaactgtcgcgcggcagctatcgcgtgcgcggcgatgtgatc
gatatctacccggcggaatccgatgatgaggcggtgcgcgtggaattgttcgacgacgag
atcgaggcgttgtcgctgtttgacccgctcaccggcgaggtgcggcgcaaggtgccccgt
tataccgtgttcccgaagacccactatgcaacaccgcgggaagtggtgctgaacgccgtc
gagcagatcaaagacgagttgcgcgagcgcctgggctggctgcgcgataacaacaaactg
gtcgaggcgcagcgcctggagcagcgcaccctgttcgatctggaaatgatgctggaggtg
ggctactgctctgggatcgaaaactacagccgctatctgtctggtcgcggcccaggcgaa
ccgccgccgacgctgtttgactatctgccagcgaatgccctgttggtgatcgacgaaagc
cacgtgacggtgccgcagctcggtggtatgtaccgcggcgaccgctcgcgcaaggaaaat
ttggttgaatacgggtttcgactgccctcggcactggataaccggccgatgcgtttcgat
gagttcgaggcgaaacagcctcaggtcatttacgtctcggccacaccgcgcgactacgag
agccgacgctccggtgctgttgtcgagcaaatggttcgccctaccggtctggtggacccg
gaggtggaggtgcgcccggccgcgagccaggtcgacgatctattgtcggagattcgccag
cgtgtggccgttggtgggcgcgtgctggcaacgacgctcaccaagcgcatggccgaggat
ctcactgattatctcggtgaacatggtgtgcgtgtacgctatctgcactccgacatcgat
acggtggagcgcgttgagatcatccgtgatctacgcctgggcgaattcgacgtattggtt
ggtattaacctgctgcgcgaaggactggatatgcccgaggtatctctggtggccattctc
gacgctgacaaggagggttttttgcgctccgagggctctctgatccagaccattggccgc
gctgcgcgcaatgctgacggcaaggcgattctttatgccgagcgcatcaccggctccatg
cgccgtgccattgacgagactgaacgccgtcgtaccaggcagatggagtacaaccagacc
catggcatcacgccgcgaaccatccagaaagcggtcgccgacatcctcgaggcgcacacg
cctggtgcaccgatgaaggcgcgtgactatgccaaagtggccgaagaaatggccgagtat
gggcgcttgacaccagcacagatgagcaagaaggtcaaggcactggagaaagaaatgcac
aaggctgctcgcgacctcgaattcgagcgcgctgccgccatccgtgaccagatcaaggat
ctgcgcgaacgcggattagccatctga
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