Thiohalocapsa sp. PB-PSB1: N838_08170
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Entry
N838_08170 CDS
T07019
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thip01002
]
N838_08170
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
N838_08170
Peptidases and inhibitors [BR:
thip01002
]
Cysteine peptidases
Family C82
N838_08170
Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
N838_08170
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
SPOR
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QQO53346
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Position
1964808..1966736
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AA seq
642 aa
AA seq
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MPTLRFRALFVALLCLLTASLCTAENRELAARIGRLQQQGELDIQGARIINSGLIGDYYA
QRGYDLAFDDNRIRDVLDGIEGMHMHGLNPDDYHRQALLAMSARSLSPALRADFELLLMD
AFLRIAAHRTHGKVNPATLDSNWNLEQPLLTTDPLAELERAMQSASPMEHLDRLLDDADF
YHKLKRALAWYRDLAAKGGWREIPSGPSLKPGMPDPRLAAVRARLQVTGELAAEAVDSAG
FDEALEGAVMTFQRRHGLDADGIIGPATLAAMNLPVAWRIDQIRVNLERARWVQRELPSD
FVLVNIAGFRIYLVRGGELVWSSRVQVGKTYRKTPVFRDAIRYLVFNPTWTVPPGILNED
ILPQARKDPDSIRRKGLRVLDGQGQEIDPRSVDWSIEPFPYLVRQDPGPNNALGRVKLMF
PNEHLVYLHDTPSKELFDRSRRTTSSGCIRVENPFDLAERVLANTPGWDRARIDQVVASE
RTTRVDLAQPLPVLILYWTAEVADQDRVAFREDIYARDKPVLRALDQEPKHRLPQRLAPV
NSVGSEQTAEPEGTASAARDRPSEGPGAWMIQVASLTNGEGAQRLVNELKTNGFSASVSK
VQLDGKTYYRVRLGPVTSHDKAQAMAADLKAKAGYQGQVLKQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctacccttcgtttccgagccctgttcgtcgctttgctgtgtcttctgacggcttct
ctctgtacggcggagaatcgcgagcttgcagctcgcatcggtcgtttacagcagcagggc
gagctcgacattcagggtgccaggatcatcaacagcggcttgatcggcgattattacgct
caacgcggatacgacctggcattcgacgacaaccgcatccgcgatgtcctcgacggcatc
gaaggcatgcacatgcatggcctgaatcctgacgattatcatcgccaagccttgttggca
atgagcgcccgctcgctatcccccgcattgcgggccgatttcgaactcttgctgatggat
gcctttttgcgtatagcggcacaccgtacccatggcaaggtcaatcccgcaaccctcgac
tcgaactggaacctcgaacagccgctgttgaccaccgatcccctggcagaactcgagcgc
gccatgcagtcagcatcgcccatggaacatctggatcggttgctcgacgacgccgatttt
taccacaagctcaaacgcgcgctggcctggtatcgagacctggctgccaagggtggttgg
cgggagatcccatccggaccctcactcaaacccggcatgccagatccacggcttgcagcc
gtgcgtgcgcgcctgcaagtaaccggcgagctggccgccgaggctgtcgatagcgcaggg
ttcgacgaggctctcgagggtgcggtgatgacctttcaacggcgtcatgggttggacgcg
gacggcattatcggcccggcgacgctggccgcgatgaatctgccggtggcatggcgcatc
gaccaaatccgcgtcaacctggagcgtgcccgttgggtgcagcgcgagctgccaagcgac
tttgtgttggtcaatattgccggttttcggatctatctggtgcgcggcggtgagctggtc
tggtcctcgcgggtacaggtgggcaagacctatcgcaagacgccggtgtttcgcgacgcc
atccgctacctggtgttcaatcccacctggacggtcccccccggcattctcaacgaagac
atcctgccgcaagcccgtaaagatccggacagcattcggcgcaagggtttacgcgtgctc
gatggccagggacaggagatcgatccgcgctccgtggattggtccatcgagccctttccc
tatctggtgcgacaggatcccggcccgaacaatgccctaggacgggtcaagctgatgttt
ccgaacgagcacctggtctacctgcacgatacccccagcaaggaattattcgatcgatcc
cggcgcaccaccagctcggggtgtattcgcgtggagaatccgttcgatctcgccgagcgg
gtgctcgccaacaccccgggttgggatcgcgcgcgcatcgaccaggtcgttgcctccgag
cgcaccacgcgcgtcgatctggcgcagccgctgccggtactgattctgtactggaccgcc
gaggtcgcggatcaggacagggtggcgttcagagaggatatctatgcgcgcgacaagccg
gtgttgcgtgccctagaccaagagccgaagcacaggctgccacagcgactggcgcccgtg
aattcggtcggctcggagcagaccgctgagcccgagggcacggcctcggcggccagggac
aggcccagcgaagggcctggagcatggatgatccaggtcgcgagtctgaccaatggggaa
ggagcacaacgcctggtcaacgagctgaaaaccaacggcttcagcgcgtccgttagcaaa
gtacagttggatggcaagacttattatcgtgtgcggctggggccggtgaccagccatgac
aaggcgcaggcaatggccgcggatctgaaggcgaaggccggctatcaagggcaggtacta
aagcaatga
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