Thiohalocapsa sp. PB-PSB1: N838_08230
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Entry
N838_08230 CDS
T07019
Name
(GenBank) TIR domain-containing protein
KO
K13730
internalin A
Organism
thip
Thiohalocapsa sp. PB-PSB1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COR
LRR_8
LRR_4
LRR_1
Roc
TIR_2
Ras
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
QQO53356
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Position
1976401..1979406
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AA seq
1001 aa
AA seq
DB search
MGKRDTRDKSLEQVIAGALRSNATELDLFGRGLTALPESLGQLTQLQSLNLRYNQLTALP
ESLGQLTQLQSLDLSFNQLTALPESLGQLTQLQSLDLSFNQLTALPEWLGQLTQLQSLVL
GGNQLTALPEWLGQLTQLQSLVLAGNQLTALPESLGQLTQLQSLDLGDNQLTALPESLGQ
LTQLQSLDLSFNQLTALPESLGQLTQLQSLDLGDNQLTALPESLGQLTQLQSLDLSFNQL
TALPESLGQLTQLQSLDLMRNQLTALPESLGQFTGLRALILSDNRLSELPQSLRGCERLE
GLFLHGNQALGIPTEVLGPEYKETRLYPLGQADLADPQTILSWYFQSRAEPTRRLNEAKM
LLVGQGGVGKTSLVHYLIHQRACNPDELPTEGINIDDWEVSGKPGGDGKCERIQIHVWDF
GGQEIMHATHQFFLTRRSLYLLVIDARAGEKESNIHYWLKIIRSYGDESPVLVVVNKCDQ
HPHELNETRLKRDYSNIRGFLQTSCADGRGIATLRREIGKQIRRLPQVFDELPQSYFEVK
AELEQTASERSFLPIDDYRGICNNHGVDKRANQDHLIRFLHDLGVVLNFQDPDDPYGQND
PYVLDPEWVTGGVYALINDRELKERLDGLLSYRKLTAVLNAQPGYPQNRHDFIVRKMQQF
ELAYPLDQGHQTSWLVPELLDPKEPESLDWQPERSLNFQYSYPVLPPGVICRLIVRMHQH
VDRECSWRSGTVLKFDQTRVLVRGDFENHKVFIAVQGPRERRKEDLAVVRNAFRHVHSTI
PALQPKEEVPLPDHPDLTVPYEHLLTLEQLHEPSLVPVGADRHYSVTDLLNGVDSTGYRN
ERQALRRHPTMTMNDKHVFVSYCHDNKADVARLVADLEAAGERVWWDEQILGGQDWKQAI
RAALKDAYAVILCLSPELTEDRYRSGVYPELRDAIATLRQCGPNHAYIFPVRLAACAVPP
IEIDDTRTLERIQHVDLFPQDQRDAGLQKLLKSLDAAPGHP
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcgtgatactcgagataaatcgctggagcaggtgatcgccggtgcgctgcgc
agcaatgcgaccgagttggacctcttcggtaggggcttgacggcgctgccggagtcgctg
ggtcagctgacgcagttgcagtcgctgaacctcaggtataaccaactgacggcgctgccg
gagtcgctgggtcagctgacgcagttgcagtcgctggacctcagctttaaccaactgacg
gcgctgccggagtcgctgggtcagctgacgcagttgcagtcgctggacctcagctttaac
caactgacggcgctgccggagtggctgggtcagctgacgcagttgcagtcgctggtcctc
gggggtaaccaactgacggcgctgccggagtggctgggtcagctgacgcagttgcagtcg
ctggtcctcgcgggtaaccaactgacggcgctgccggagtcgctgggtcagctgacgcag
ttgcagtcgctggacctcggggataaccaactgacggcgctgccggagtcgctgggtcag
ctgacgcagttgcagtcgctggacctcagctttaaccaactgacggcgctgccggagtcg
ctgggtcagctgacgcagttgcagtcgctggacctcggggataaccaactgacggcgctg
ccggagtcgctgggtcagctgacgcagttgcagtcgctggacctcagctttaaccaactg
acggcgctgccggagtcgctgggtcagctgacgcagttgcagtcgctggacctcatgcgt
aaccaactgacggcgctgccggagtcgctgggtcaattcacagggttgcgagcactgatc
ttgtctgacaaccgcctgtcggaactgccccaatcactgcgtggctgcgagcgcctggaa
ggcctctttctgcacgggaatcaggccttgggtatcccgacggaggtgctcggaccagaa
tataaagaaacaaggctttatcccctaggacaggccgacctcgccgatccccaaacaatc
ctgtcctggtacttccaatcccgggccgagccgacgcgcaggctcaacgaggccaagatg
ctgttggtcggccagggcggcgtcggcaaaacctcgctggtgcattacctgattcatcag
cgggcctgcaatccggacgagctgccgacggagggcatcaatatcgacgactgggaggtg
tcgggcaagccgggcggcgacggcaaatgcgagcggatccagatccatgtctgggacttt
ggcggtcaggagatcatgcatgcgacgcatcagttctttttgaccaggcgcagcctctat
ctgctggtcatcgacgcccgggccggggagaaggagagcaatatccattattggctcaaa
atcatccgcagctacggcgacgagtcgccggtgctggtggtggtcaacaaatgcgaccag
catccccacgagctgaacgagacgcggctgaagcgcgactattcgaacatccggggcttc
ctccagaccagctgtgccgatggtcggggaatcgcgactctgcgacgcgaaatcggcaag
cagattcgccgattgccgcaggtcttcgatgaattgccgcaaagctacttcgaggtcaag
gcggagctggagcagacggcctccgagcgcagctttctgcccatcgacgattatcgcggc
atctgcaataatcatggcgtggacaagcgcgccaatcaggaccatctgatccgctttttg
cacgacctgggcgtggtgctgaacttccaggacccggatgatccctatggccagaacgat
ccctatgtgctggacccggagtgggtcaccggcggcgtctacgccctgatcaacgaccgc
gagttgaaagaacggctggacggcctgctgtcctaccggaagctgacagcggtgctgaat
gcgcagccgggttatccgcagaaccgccacgattttatcgtgcgcaagatgcagcagttc
gagctggcctatccgctcgaccaaggccaccagaccagctggctggtgccggaattgctc
gatcccaaggagcccgagagcctggactggcagccggaaagatcgctgaactttcagtac
agctatccggtcctgccgccgggggtgatctgtcgcttgatcgtgcgcatgcaccagcat
gtggaccgcgaatgcagttggcgcagcgggacggtgctgaagttcgatcagacccgggtg
ctggtgcgcggggatttcgagaaccacaaggtattcatcgccgtgcaggggccgcgcgaa
cggcgcaaggaggatctggccgtggtccgcaacgccttccgccatgtgcattcgaccatt
ccggcattgcagcccaaggaggaggtgccgttgccagatcatccggatctgaccgtgccc
tatgagcacctgttgacgctggagcaactgcatgagccatcactggtcccggtcggcgcc
gataggcactattctgtcaccgatctgctgaacggtgtggattcgaccggctatcgcaat
gaacgccaggcgctgaggcgccatccgacaatgaccatgaacgacaaacatgtcttcgtt
tcctattgccatgacaacaaggccgatgtggcgcggctggtggccgatctggaggccgcc
ggcgagcgcgtctggtgggacgagcagatcctcggcgggcaggactggaaacaggcaatt
cgcgcggcgctgaaggacgcttacgccgttatcctctgcctgtcgccggaattgaccgaa
gaccgctatcgctccggcgtgtaccccgaactgcgcgatgccatcgcgacgctgcgccag
tgcggccccaaccatgcctatatcttccccgtgcgcttggcggcatgcgcggttccgccc
atcgagatcgacgacacgcgaaccctggagcgcattcagcatgtcgatctgtttccgcag
gaccagcgcgacgccggcctgcaaaagctactgaaatccctggatgccgcgcctgggcat
ccctga
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