Thiohalocapsa sp. PB-PSB1: N838_08315
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Entry
N838_08315 CDS
T07019
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thip03400
]
N838_08315
DNA repair and recombination proteins [BR:
thip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
N838_08315
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
ResIII
FtsK_SpoIIIE
TrwB_AAD_bind
nSTAND_NTPase5
Hydrolase
CbiA
AAA_25
T2SSE
AAA_16
AAA_28
AAA_30
AAA_7
AAA_19
SRP54
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
QQO57733
LinkDB
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Position
complement(1994608..1996083)
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AA seq
491 aa
AA seq
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MQNDILIGKGTHPVSIRPQMANRHGLVAGATGTGKTVTLQRLAEQFSRLGVPVFLADVKG
DLAGISQAGGGNDRVAERVVELGLQAEGFRYAACPVILWDLYGEQGHPVRTTISEMGPML
LSRLLELNDVQQGVLTICFRVADENGLLLLDMQDLRAMLTYVADHAAALRTRYGNVSAAS
VGAIQRRLLTLEDQGGRLLFGEPALDLADLMQTDEHGHGVVNVLAADRLIRNRALYATFL
LWLLSELFEQLPEVGDPHKPKLVFFFDEAHLLFDDAPKVLIDKVEQVVRLIRSKGVGVYF
VTQSPMDVPDEVLGQLGNRVQHALRAFTPRDQKAVRAAAQTFRQNPDLDSEQTITTMGVG
EALASTLDSDGIPGIVQHIKVAPPGSQLGPVTPEQRRALMASSLVAGIYDRTIDRESAYE
ILKLMADQAALAAETASAATNSRPSRATSRRGAQTPLEAFAASTMRSLGTQLGRQLVRGT
LGSLFGGRRRR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacgacatcctgattggcaaaggcacgcatccggtttcgatccgcccgcagatg
gctaatcgccatggccttgtggctggcgccaccggcaccggcaagacagtgaccttgcaa
cgcttggccgaacaattcagtcgcctgggtgtgccggtttttctggcagatgtcaagggt
gatctggccggcatcagccaagccgggggcggtaatgaccgggttgccgagcgcgtcgtc
gaactcggcttgcaggccgaaggctttcgctatgccgcctgtccggtgattctatgggat
ctgtatggcgaacagggccacccagttcggaccaccatcagcgagatggggccgatgctg
ttatcccgcctgttggaattgaacgacgtgcagcagggtgtgctgacgatctgctttcgc
gtcgccgacgaaaatggcctgctgctgctggatatgcaggatttgcgggcaatgctgacc
tatgtcgccgatcatgctgccgcattgcggaccaggtatggcaatgtgtccgcggcctcc
gttggcgccattcagcgccggttgctgacattggaagatcaaggggggaggctgctgttc
ggcgagcccgcgctggacctggcggacctgatgcagaccgacgaacacggccatggcgtg
gtcaacgtgctggccgcggatcgcttgattcgcaaccgggcgttgtatgccacctttttg
ctatggcttctatccgagttgttcgagcaattgccggaggttggcgatccgcataagccg
aagctggtgttctttttcgacgaagcgcatctgctcttcgacgatgcacccaaagtgctg
atcgataaagtcgaacaagtggtgcgactgatccgctccaagggcgtcggcgtgtacttt
gtcacgcaaagcccgatggatgtgccggacgaggtgctgggacaactcggcaatcgggta
caacatgccttgcgtgcattcaccccaagggatcaaaaagcagtacgtgcggcagcccag
acctttcgccaaaatccagatctggacagcgagcagaccatcacgaccatgggcgtcggc
gaggcgctggcatcgacactcgacagcgacggcattcccggcatcgtgcagcatatcaag
gtggcgccgccgggcagccagctcggcccggttacgccggaacaacgacgtgcactgatg
gccagctcgcttgtggccggaatctatgaccggactatcgaccgggagtccgcctacgaa
atcctgaagctgatggccgaccaggccgcgctggccgccgaaaccgcgtcggcagcgacc
aactcgcggccaagccgagcgacgtccaggcgcggcgcgcaaacgccgctggaggcgttc
gccgccagtaccatgcgctccctgggcacacagctcggacggcaactggtgcgcggcact
ctgggttcgttattcggcggtcgcaggcgacgctga
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