Thiohalocapsa sp. PB-PSB1: N838_08830
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Entry
N838_08830 CDS
T07019
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
N838_08830
Enzymes [BR:
thip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
N838_08830
Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
N838_08830
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Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_3
PG_binding_2
DZIP1
Motif
Other DBs
NCBI-ProteinID:
QQO53446
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All DBs
Position
complement(2122455..2124122)
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AA seq
555 aa
AA seq
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MTNSTSFYCRSSINQSAGRSWSPVPWRNAPWVRDELAWTRTVGKRGLGGLCSIGLLASVG
LTTGLWALSSLADTPSANVPSRPLVQSLPSTTTSEMPVPFANWLSNFAVRAGAAGITEQT
LNSALADLQPNQQLLDLDRRQSEYNQTFFAYLHNNVSERRIQRGRKLMALHADLLAGLER
RYAVPGQVLIALWGMESDFGGNTGNYALFRSLATLAHAGRRRAFFEQQLLAALQIIDQGS
STPAGLRGSWAGAMGQLQFMPTTYLDYAVDGDDDGRADIWGNPADALASGAHYLWSVGWQ
PDLRWGWEVRLPNGFDFYQARLSNELPLSHWHSIGVTNADGRYLPSANRKGSILLPAGKD
GPAFLVTSNFHVLTDWNRSLHYALTVAHLSDRLAGGDPLQSGPPANDQRLARRDVMAMQR
DLDTLGYAVGAADGMVGFQTRHAVREYQRDQGLPADAYPTPTLIARIAADARPNSLAAAR
LPANSSAPSPAGDPGIASLQQDLLKLGFDPGRPDGLLGPKTRAALQAYQQRMGLPVTGEP
SSELVARINADARAK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacagcacctccttttactgtcgttcgagcataaatcagtctgccggccgctcg
tggtcacctgtaccctggcgaaatgccccatgggtacgcgatgaattggcgtggacgcgc
acagtcggcaagcgcgggcttggcggtctttgctcgatcggcttgctggccagcgtcggt
ctgacaacgggcctgtgggcgctctcctcgctcgccgatacgccctctgcgaatgtaccc
agccgcccactggtgcaatctctgccatcgacgacgacatcggaaatgccggtcccgttc
gccaactggctgtcgaattttgccgtgcgtgccggcgccgcgggcatcaccgaacagacc
ctgaactcggcccttgcggatctgcaacccaaccaacagctgcttgatctggaccgccga
cagagcgaatacaatcagactttctttgcttacctgcataacaacgtttccgaacggcgt
attcaacgcgggcgcaagctgatggcattacatgccgatctgcttgcaggtctggagcgt
cgctatgctgttcccggccaggtcctgattgccctctggggcatggaatcggactttggc
ggtaataccggcaattacgccctatttcgcagcctagccacgctggcgcatgcgggtcgc
cggcgcgcatttttcgaacaacaactgctggccgcattacagatcatcgatcaggggtcc
agcacgccagcaggcttgcgcggttcctgggctggcgccatgggccagctccaatttatg
ccgaccacctatctggactatgctgtcgatggcgacgacgatggccgcgccgatatctgg
gggaaccccgccgatgcattggcatcgggcgcgcattatctctggtcggtcggttggcag
cctgatctgcgttggggctgggaagtacgactgccgaacggattcgatttctaccaggca
cgcttgtcgaatgaattgccgttgagccattggcacagcatcggagttaccaacgcggat
ggtcgatacctgccaagtgcaaatcgcaagggttccatcctgctgccggcgggcaaagac
ggcccggcttttttggtcaccagcaattttcatgtcctcaccgactggaatcgctcgctg
cattacgctctgaccgtcgctcatctatccgatcgactggcaggcggcgatcctctgcaa
tcgggtccgccagcgaacgatcagcgcttggcccgccgtgatgtcatggccatgcagcgc
gatcttgatacactcggatatgccgttggcgcggcagatggcatggttggtttccaaacc
cggcacgccgtgcgcgaataccagcgcgatcaaggtctgcccgcggacgcctatccgacc
ccgaccctgatcgcccgcattgccgccgacgcgaggccaaactcgcttgcagcagcccgc
ttgccagccaacagcagcgcgccgagccctgccggcgacccaggtattgccagtttgcaa
caggatctgctcaaacttggatttgaccctggcaggccggatggtctgctcggcccgaag
actcgcgctgcactgcaagcctaccagcagcgcatgggacttccggtcacgggggagccg
agttccgagttggtcgctcgcatcaacgccgatgcgcgggcaaaatga
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