KEGG   Thiohalocapsa sp. PB-PSB1: N838_09230
Entry
N838_09230        CDS       T07019                                 
Name
(GenBank) AAA domain-containing protein
  KO
K07452  5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
Organism
thip  Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:thip00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:thip02048]
    N838_09230
Prokaryotic defense system [BR:thip02048]
 Restriction and modification system (R-M system)
  Type IV R-M system
   N838_09230
SSDB
Motif
Pfam: AAA_5 AAA nSTAND3 AAA_22 AAA_16 AAA_19 RNA_helicase IstB_IS21 PhoH AAA_7 AAA_25 AAA_24 NACHT RuvB_N AAA_18 Mg_chelatase DEAD AAA_11
Other DBs
NCBI-ProteinID: QQO53513
LinkDB
Position
2203423..2205792
AA seq 789 aa
MNEQVQRILNQYLAAELGRSLVLPDVTEISQQRTGFLALFGPEKLATMSGPELLRLLPHN
ALIDQPMDYWLEFKDDQEFNYRLFGSISGGSAAKFGPWQEKQSGSWRAKKPGSRAIHRIT
EDEALDALQQRRNEMLDTVEALRAFHGQAVEDIDPGAFQSLVERAAPRWHASTWLHKYLH
LVFPDLVTLNATQAWSEAGLYGVGIVPSTAGLYALDSQIIRFWNSLPALGELPVQMRYRV
GRALAPRDHWCLGLAGEVSAWKEMLAHEYLALGPAKVGSLAEAMTLTKKRDIRTAVETAF
TDAGLRPESQEAHNLTELVYRLKEGSLVALFSDASTVEAVGEVTGGYRFARGGDRPHRVP
VRWYHNRSFETSVHVDVGRNLMILEPTHAVVADVEASLLINGIGPWPGFGTSGQERSTLP
SRHSLAVGSGTTGSDAEPFAPLEGIARHVVDMLERKRQVILYGPPGTGKTYHAERIALEI
VARENFHCLPSQLSDRQRDAVYGRDGADRFIATCTFHPMYSYEDFIEGYRPDGEGFALDD
GIFKQMVTKAQAQPGKRFVLIIDEINRGNIPKIFGELITLIEASKRGTTSSMLPLSKKPF
SVPDNLLVIGTMNTADRSILLLDTALRRRFGFKELLPEPHLLRTGCIADTTLSTWLRALN
RRIVEQLGRDGRNLQVGHAYLMPGGKPAATISRIGEIVRDELWPLLQEYCYEDPNKLANI
LAADKGGIYDRESANLRFDLFDAGREDALAQALIAIVTPDDKKQDAILGEDVQDDEDAEE
PLTDESGTA
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgaacgagcaggtccagcgcatcctcaaccaatacctggcagcggagcttgggcggtcc
ctggtccttcccgatgtcacggagatctcccagcagcgcaccgggttcctggcgctgttc
ggaccggagaaactcgcgacgatgagcgggccggagctgctgcgtttgctcccgcacaat
gccttgatcgaccagccgatggactactggctggagttcaaggacgaccaggagttcaac
tatcggctgttcggaagtatctccggcgggtcagccgccaagttcgggccttggcaggag
aagcaatccgggtcgtggcgcgctaagaagccaggctcgcgcgcgattcacaggatcacc
gaggatgaagcgctcgatgccttgcagcaacggcgcaacgagatgttggacacggtcgag
gcgcttcgggcattccatggccaagccgttgaggatatcgatcccggtgcctttcaatct
ttggtcgagcgcgccgcgccgcgctggcatgcgagcacttggctgcacaagtacctgcat
ctcgttttcccggatctggtgaccttgaacgcgacgcaggcgtggtcagaggcgggactc
tacggcgtcggcatcgtgccgagcaccgccggactttacgccctggacagtcagatcatc
cgtttctggaacagccttcccgccttaggcgagctgcccgtgcagatgcgctatcgcgtc
ggcagggcgctggcaccacgggaccactggtgccttggcctggcgggagaggtgtccgcg
tggaaggagatgctcgcgcatgagtatctcgcgttgggtccagcgaaggtgggaagcctg
gccgaggcgatgacgctcacgaagaaacgggatattcggaccgcggtagaaacagcgttc
acggacgccggtctgcgtcccgaatcgcaggaggcgcacaacctcacggagctggtttat
cgactcaaagagggcagtctcgtcgcgctgttctcggatgcctcgacggttgaagccgtc
ggcgaggtgaccggtggctaccgcttcgcccgcggcggggaccggccccatcgggtgccc
gttcgctggtaccacaaccgtagcttcgagacctcggtgcatgtcgatgtcggacggaac
ctgatgatcctggagccaacccatgcggtggtagccgatgtagaggcctctctgctgatc
aatggaatcggcccctggcctgggttcgggaccagtgggcaggagcgctcgactcttcca
tcgaggcattcgctggctgtcggcagcgggaccaccggctccgacgccgaaccctttgct
ccactggagggtatcgcccgccacgtggtagacatgctcgaacgcaagcgccaggtcatc
ctctatggtccgccaggcaccgggaagacctaccatgcggagcgcatcgcgctggagatc
gtcgccagggagaacttccattgcttgccttcccagctctccgaccggcagcgtgatgcc
gtgtatggccgcgatggcgcggaccgcttcatcgcgacctgcacctttcaccccatgtac
tcctacgaggatttcatcgagggatacaggccggacggcgaaggctttgcactggatgac
ggcatcttcaagcagatggtgaccaaggctcaggcgcagcccgggaagcgcttcgtgctc
atcatcgatgagatcaaccgaggcaatatcccgaagatcttcggcgagctgatcaccctg
atcgaggcatcgaagcggggtacgaccagctccatgctgccgctgtcgaagaaaccgttt
tccgttccggacaacctgcttgtcatcggcacgatgaacacggcggatcgctccatcctg
ttgctcgatacggcccttcggcgccgcttcggcttcaaggagctgctgccggagccgcac
ctgctccggaccggctgcatcgccgacaccaccttgagtacctggctgcgggcgttgaat
cggcgcatcgtcgaacagctggggcgcgatggccgcaacctgcaggttgggcatgcctat
ctgatgcccggtggcaaaccggccgcgaccatcagccgcatcggcgagatcgtgcgtgac
gagctgtggccgctgttgcaggaatattgctacgaggacccaaacaagctcgcaaacatc
ctggctgccgataagggcggcatctatgaccgagagagcgccaacctgcgcttcgatctg
ttcgatgccgggcgggaagatgcactggctcaagccctgattgccatcgtgacgccggac
gacaagaagcaggacgccattcttggggaggatgtgcaggacgacgaggacgccgaggag
ccgttgacagacgagtcggggactgcatga

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