Thiohalocapsa sp. PB-PSB1: N838_09605
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Entry
N838_09605 CDS
T07019
Name
(GenBank) DEAD/DEAH box helicase
Organism
thip
Thiohalocapsa sp. PB-PSB1
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
DUF5546
DUF4913
Motif
Other DBs
NCBI-ProteinID:
QQO53568
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Position
complement(2275012..2278212)
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AA seq
1066 aa
AA seq
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MNILHAFWLPETGTDFVQSGTLRLWCEADASATGARQSKSKRHPSQLPRSDWPALLDGLG
LAGGQSATPPSPCQLRLPSIGARPLPCPEIAKAMPEPMELSGAEPGIWEVDTIVLERPIK
QISDLHYLAAFAIDDLQPGSDFLFWYWFTQTLKQRLLRDQYLPALRWRQPPKPKGKRKLP
APELWSGWQWAAGDDDPLLATAAECMPAACAAGLSAGPATGKKADTDAQRIFEPTSLLRH
CAEVLLDELIRQTKWPAGLKKRVDDTLLAPGLSSKAACWTPAGPWPEVALEQQRQWQAWR
ERILGNDQTAAFRLGFRLEEPPIGNADDLDNDFANADSDAHWRLHFIAIAADDPSHQLPL
ADYWSASASERATHRAIFGADFEPGLLLNLGLAARMVPMLWAGLRSAKPQSVTLDLDAAF
SFLTEAAWVLEDAGYRIIVPAWWTPKGRQRVKLRLRQTTSQAKPSGSSPSAGHVSLDKLL
QYRYELAIGDQTLSAEEWQQLVEAKTPLVRFRGQWIELDRDKMQEMLAFWREHGDETPSM
SLQEILRRSAEDDAFEVDPDAALADMLERLHDQSQLQPVESPAGLQAELRDYQKRGLAWL
GFLEELGLNGCLADDMGLGKTMQVIARLVQERQGADPVAPTLLVAPTSVIGNWQKEVERF
APGMRTFIHHGAQRDKTPGALRANAVEHDMVITSYALVRRDQKLLAGVDWHRVVLDEAQN
IKNPKADQTRAVLKLPSRHRLALTGTPVENRLTDLWSIFNFINPGYLGTPARFRKRFELP
VQRDNDPVQTATLKRLVEPFILRRVKTDKAIIADLPDKLEAIAYCNLSREQAALYESVVR
DVDQQLVEKTGIERQGLMLSTLMRLKQICNHPAQFLQDGSAFTAERSHKLERLQAMLDEV
MAEGDSVLIFTQFTEIGEQLERSLRSERHHNTYYLHGGTSRTRREQMIDAFQDPNGEPSV
FVLSLKAGGVGITLTKANHVFHFDRWWNPAVEDQASDRAYRIGQQKTVFVHKFVTLGTLE
ERIDAMIQDKKALAGAIVGSDESWLTQLDNDRFKDLIRLNRQAVMG
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaacattctgcatgccttttggcttccggagacgggaaccgactttgttcaatcagga
accctgcggctgtggtgcgaagccgacgcgtcggcgacaggcgcccgacagtccaagtcc
aaacggcacccgtctcaactgccacgatcggactggccagcactgcttgacggtcttggg
ctcgcgggcggccagtccgcaaccccgccatcgccttgccagttgcgcttgccgagcatt
ggcgcacgcccgctgccctgccccgagatcgccaaggccatgcccgagcccatggagctc
tccggcgccgaaccgggtatctgggaagtcgacaccattgtgctggaacgacccatcaag
cagatcagcgatctgcactatctggccgccttcgcgatcgacgatctgcaaccgggcagc
gacttcctgttctggtattggtttacccaaaccttgaagcagcgcctgctgcgcgaccaa
tacctgccggcgctgcgctggcggcagccgcccaaacccaagggtaagcgcaagctgccc
gcgccggagctctggagcggctggcagtgggcagccggcgatgatgacccgctgctggcg
acagcggccgaatgcatgccggcggcctgcgctgccggtctcagtgctggcccggctacc
ggcaagaaggcagacaccgacgcacaacgcatattcgagcccacgagtctgctgcgccac
tgcgccgaggtgctgctcgatgagctgatccggcagaccaaatggcccgccgggctgaaa
aaacgcgtcgacgacaccctactcgcccccgggctctcttccaaggccgcctgctggacg
ccagccggtccctggccggaggtcgcgctggaacaacagcgtcaatggcaggcctggcgc
gaacgcatcctcggcaatgaccagaccgcggcctttcgcctgggctttcggctcgaagaa
ccgccgatcggcaatgccgacgacctagacaacgactttgccaacgccgattcggacgct
cactggcgcctgcatttcattgccatcgccgccgacgacccgtcgcatcagctgccgctg
gcagactactggtccgcgtcggcatccgagcgcgccacccatcgcgccattttcggtgcc
gacttcgaacctgggctgctgttgaatctcggtttggccgcgcgcatggtgccgatgctc
tgggccggactccgcagcgccaaaccgcagtctgtgacgctggatctggatgcggccttc
agcttcctgaccgaggccgcctgggtgctggaggatgccggctaccgcatcatcgtcccg
gcctggtggacgccgaagggccgccagcgcgtcaagcttagattgcgacagacgaccagc
caggccaaacccagcggcagcagtcccagcgccggccatgtcagcctggacaagctgctc
cagtatcgctatgaactggccatcggcgatcagaccctgagcgccgaggaatggcagcag
ctggtcgaggcaaaaacgccgctggtccgctttcgcggccagtggatcgagctggatcgg
gacaagatgcaagaaatgctcgccttctggcgcgagcacggcgacgagaccccgagcatg
agcctgcaggagatcctgcggcgcagcgccgaagacgacgccttcgaggtcgaccccgat
gcggccctggccgatatgctggagcgactgcacgaccaaagccagttgcagccggtcgaa
agcccagcaggcctgcaagcagagctgcgagactaccagaagcgcggcctggcctggctc
gggttcctggaggaactcggcctgaacggctgcctggccgatgacatgggcctgggcaag
accatgcaggtcatcgcccggctggtgcaggaacgccagggcgcggaccccgtcgcccca
accctgctggtcgcacccacttccgtgatcggcaactggcaaaaggaggtggagcgcttc
gcaccgggaatgcgcaccttcatccatcacggcgcgcagcgcgacaaaacccctggtgca
ttgcgcgccaacgcggtggaacatgacatggtcatcacctcctacgccctggtgcggcgg
gaccaaaagctgctggccggcgtcgactggcatcgggttgtccttgacgaggcccagaat
atcaaaaaccccaaggccgaccagacccgggccgtgctcaagctcccgtcccgccatcgt
ctggccctgaccggcaccccggtggaaaaccggctgactgatctctggtctatcttcaat
ttcatcaaccccggctatctcggcaccccggcgcgctttcgcaagcgcttcgaactgccg
gtgcagcgcgacaacgatccggtgcagaccgccaccctgaagcgcctggtggaaccgttc
atcctgcgtcgggtcaagaccgacaaggccatcatcgccgatctgccggacaagctcgag
gcgatagcctactgcaacctcagccgcgagcaggcggcactgtacgaatcggtggtgcgc
gacgtcgaccagcaattggtggaaaagaccggcatcgaacgccagggcctgatgctctcc
acattgatgcgactaaagcagatctgcaaccatccggcgcagttcctgcaggacggcagc
gccttcaccgccgagcgctcgcacaagctcgaacgcctgcaggccatgctcgatgaagtc
atggccgagggcgacagcgtgctgatcttcactcagttcaccgagatcggcgagcagctc
gagcgcagcctgcgcagcgaacgccaccacaacacctactatctgcacggcggcacctcg
cgcactcggcgcgagcagatgatcgacgccttccaagacccgaatggcgagccctcggtg
ttcgtcttatcgctcaaggctggcggcgttggcatcaccctgaccaaggccaaccacgtg
ttccatttcgaccgctggtggaacccggctgttgaggaccaggccagtgatcgcgcctac
cgcatcggccagcaaaagaccgtcttcgtgcacaaattcgtcaccctcggcaccctggag
gagcgcatcgacgccatgatccaagacaaaaaggccctggccggcgccatcgtcggcagc
gatgagtcctggctgacccagctcgacaacgaccgtttcaaagacctgatccgcctcaat
cgccaggcggtgatgggctga
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