Thiohalocapsa sp. PB-PSB1: N838_09620
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Entry
N838_09620 CDS
T07019
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip03030
DNA replication
thip03430
Mismatch repair
thip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N838_09620
03430 Mismatch repair
N838_09620
03440 Homologous recombination
N838_09620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thip03032
]
N838_09620
03400 DNA repair and recombination proteins [BR:
thip03400
]
N838_09620
Enzymes [BR:
thip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N838_09620
DNA replication proteins [BR:
thip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N838_09620
DNA repair and recombination proteins [BR:
thip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N838_09620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QQO53570
LinkDB
All DBs
Position
2279984..2280652
Genome browser
AA seq
222 aa
AA seq
DB search
MTSAGKRILADSLNLYQSCFDQTWQDDTPLQKLRFVVLDCETTGLDARRHRIISIGAIAV
SRCEIDLSDGFEALLRVRFNTAATLVHGITRDETRTGLDETAALAGLLPYIRDGVIVGHH
IGHDLAMINAALERQANICLRNRHLDTGELLLLLQNDGAFADRSAPIDLSLDGLCALFGI
VPYDRHTAPGDAFLTAQVFLRLLRLAVRHGRRTLARLSERLP
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgccggcaagcgcatactcgccgacagcctgaacctctaccaatcttgtttt
gaccagacctggcaggatgatacgccattgcaaaagctgcgttttgtcgtgctcgactgc
gagaccaccgggctggatgcacgccgacatcggatcatcagcatcggtgcgatcgccgta
tcccgctgcgagatcgacctcagcgatggctttgaggctttgttgcgggtgcgtttcaat
actgccgcaacgctggtgcatggcatcacccgcgacgagacccgcaccggtctggacgag
acagcagcactggcagggttattgccctatattcgagacggtgtgattgttggtcatcat
atcggccatgatctggccatgatcaatgcggcattggagcgccaagccaacatctgcttg
cgcaaccggcatctcgatactggcgagttgttgttgttgcttcagaacgatggcgccttt
gccgatcgctcggcgcccatcgacctgtctctggatggactctgcgccttgttcggcatc
gtgccctatgatcgccataccgcccccggtgatgcgttcttgaccgcgcaagtctttttg
cgcctgctgcgtctggccgtgcggcatggtcgccgcacgctggctcgattgtccgagcga
ttaccatga
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