Thiohalocapsa sp. PB-PSB1: N838_10225
Help
Entry
N838_10225 CDS
T07019
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N838_10225 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thip01007
]
N838_10225 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thip03016
]
N838_10225 (lysS)
Enzymes [BR:
thip01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
N838_10225 (lysS)
Amino acid related enzymes [BR:
thip01007
]
Aminoacyl-tRNA synthetase
Class II (A)
N838_10225 (lysS)
Transfer RNA biogenesis [BR:
thip03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
N838_10225 (lysS)
Prokaryotic type
Other AARSs
N838_10225 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QQO53673
LinkDB
All DBs
Position
2414381..2415895
Genome browser
AA seq
504 aa
AA seq
DB search
MSATEVSEQDALDENKLIAQRRDKLNQIRAQGIAFPNDFRRNAVAGDLHTEYGEMDATEL
ETRNVRAKVAGRLMSRRVMGKASFAHLQDMSGRIQLFVQRDQLSPETYAWFKKDLDIGDI
CGASGALFKTKTGELSIRVDSLRLLTKSLRPLPEKWHGLSDQESRYRQRYLDLIMNAAAC
ATFRMRTRIIQFLRQFLNARDYLEVETPMMQAIPGGAMARPFVTHHNALDMQLFLRIAPE
LYLKRLVVGGFEKVYEINRNFRNEGLSTRHNPEFTMLEFYQAYADYQDLMDLTEAMIRDL
AGAVLGSTSLTYQGETYDLSRPFQRMSVRESILHFNPDLVAEDLDQLERARAVAERLGIH
LEDGYGLGKVQVEIFEKTVEGQLMQPSFITDYPAEVSPLARRNDSDPFVTDRFEFFVAGR
EIANGFSELNDAEDQAERFRQQVADKDAGDLEAMHFDADYIRALEHGMPPTAGEGIGIDR
LVMLFTDSPSIRDVLLFPHMRSLD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctacagaagtatccgaacaagacgcccttgacgaaaacaagctgattgcccag
cggcgcgacaaattgaatcagatccgagcgcagggcatcgcttttccgaatgattttcgg
cgcaatgccgtcgctggcgatttgcacaccgagtatggcgagatggatgcgacggagttg
gagacgcgcaacgttcgcgccaaggtggccggtcggctgatgagtcggcgggtcatgggc
aaggccagttttgcacatctgcaggacatgagcgggcgcattcagctgtttgtgcaacgc
gatcagctcagtcccgaaacctatgcctggtttaaaaaggatctggatatcggcgatatc
tgcggcgcgtctggtgcgctcttcaagaccaagaccggtgagctgtccatccgggtcgat
tcgctgcggctgctgaccaagtcattgcggccattgccggagaaatggcacggattgtcc
gatcaggagagccgttaccgtcagcgctatctcgatctgatcatgaacgcggcggcctgc
gccacttttcgcatgcgtacgcgcatcattcagttccttcgccagttcctcaacgcgcga
gattatctcgaggtcgagacgccgatgatgcaggcgattcccggcggtgccatggcaaga
ccctttgtcacccaccacaatgcattggatatgcaattgtttttgcgcatcgccccggaa
ttgtatttgaagcgactggtggtgggtggctttgagaaggtctatgagatcaatcgcaac
tttcgcaacgaggggctctccacgcggcataatccggaatttaccatgctggagttctat
caggcgtatgccgactatcaagacttgatggatctgaccgaggcgatgatccgggatcta
gccggggccgttctcggcagcaccagcctgacctatcagggcgagacttacgatctgtcg
cggcctttccaacgcatgagcgtgcgcgagtcgatcctgcacttcaatccggaccttgtc
gccgaggatctcgatcagctggagcgcgctcgcgccgtcgccgagcgtttggggattcac
ctcgaggatggttacggtctggggaaggtgcaggtggagatcttcgaaaagaccgtagaa
ggtcagctcatgcagcccagtttcatcactgattatcccgccgaggtgtcgccgctggcg
cggcgcaacgacagcgacccgttcgttaccgaccgtttcgagttttttgtcgccggtcgc
gaaatcgccaatggcttttcagagctcaacgatgccgaagatcaggccgagcgttttcgc
cagcaggtggcggacaaggacgctggcgatctagaggcgatgcatttcgatgccgattat
atccgagctctagagcatgggatgccgccgacggcgggcgagggcatcgggatcgatcgt
ttagtcatgttgttcaccgactcgccatccattcgcgacgtgttgctgtttccgcacatg
cgttcgttggactga
DBGET
integrated database retrieval system
