Thiohalocapsa sp. PB-PSB1: N838_10935
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Entry
N838_10935 CDS
T07019
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N838_10935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7507
DUF11
HYDIN_VesB_CFA65-like_Ig
DUF1573
DUF7617
CARDB
Motif
Other DBs
NCBI-ProteinID:
QQO53795
LinkDB
All DBs
Position
2560970..2568511
Genome browser
AA seq
2513 aa
AA seq
DB search
MTNLVKHSKLSSCLRHAVARVALPVLLLLSLAGMQPAAAFIPVQTYYVPLPEDELLSSFR
DMTTRCSACTTPRSPIRTLISIVVSADGTQILYDQHEDGYERDPSNPAGLKPGGTTEIWG
DGDLSNGVAPGYPSDLLNAGDVISLDNDVSVPSSAIFFDGADKIVASFPVVMTRAAIPTG
PGALQAGAMEALPIERWGTSYVAPVGVNTRDSNSMFQYNALYVMARTDNTVCAIDPDPAR
TGEPGEGTQTLNEGKTLVVENVHDGGTVDCDKNVHVDQITGDIGVNYETRWFSLTPTSRL
ANDYYGPVGNPRDKGETFVYVHNPTGSSMTVQCQTDAGSCGSRTLSPGETWRTSRIPDGS
GVRVFSNNAGDRFAALSVIDYGGQIYDWGYTLEPRKELSTQALVGLGLGCTNSNSCDRSR
SVIWVTPTADTTIYVNRDGAPASCPGGGGADESHFVRALEAVLLTDPSDNDMTGARIYTC
DENAPFVAAWGQDPERSRSGDNEGLDMGTLVPPLPRVSATKFAALFIDADGDGDFSPGDT
IRYSIRVSNNSQFELPVDAINVQDSLPTAASYVPGSTTYQADDSTATIPVADDTSGTAFP
LDDAGKNNLAVIPGNQAATFAFDVLIDVTRGDCDDDFVNTGEVRFPVDSTDPIPLEDRRR
LTCSPAIDLEKSTNGDDADSPTGPVLAVGAQVDWEYVVTNIGNTPLDSIQLFDDKLVTVG
CPQPTLAPGASMTCTETGTAQAGQYSNTGYVTANHEGTTVKDHDPSHYFGGNASIDIEKS
TNGEDADTQTGPVVEVGSPVTWNYVIHNTGDLVLSNVVVTDNQGVTVTCPPAASTLDPGE
KQVCTATGTAAPGQYANIGTVTGTPPIGANVTDTDPSHYLGVTPSVSIEKATNTEDADTA
PGPRIAVGGQVSWTYEVENTGETLLAQVGVVDSDPGVTVNCPLQSLTPGQSMTCTATGTA
TAGQYSNTGTVIGATPRGTVVKDTDPSHYFGAQPGLTLQKSTNGQDADTAPGPSIEVGDP
VTWTYLVTNTGNEPLTGISVTDDPMPTGGITCDSTTLAPGESTNCHASGIAVAGLFANTA
TATGAPPSGPNVTSPPDPSHYTGVGGSISIEKATNGDDADSPTGPRIAVGGAVNWTYVVT
NTGSVDLTDVTVTDDQGVTVTCPQTTLAVGEPMTCAASGTAVAGQYANLGTVTALTPNGS
RVTDTDPSHYFGGRPSIDLEKATNGFDADTGTGPAIPVGDSVNWTYLVTNNGNEPLNSVS
LIDNPAQTITCPRTALDVGESMTCTASGTAIAGQYENEATATGTPPSGPDVVHRDPSHYF
GGDPGIDIEKLTNQHDADNAPGPIIPEGASVTWTYRVRNIGNQQLTDVTVEDDQLVDDTV
INCGEGTDNVISDLAPSEVVLCTASDVAIAGQYANEATVTGTTPGFGTVTDRDPSHYFGA
HPGLSLEKRVNDLDADVAPGPEVLVGDTVTFTFRVENTGNEDLTAVTVVDDQLGTIACPQ
DTLDVGERMICTVEAIATLGQHENTATATGTPPNGTPLTPVPDKGHYFGAHPGIMLEKRI
NGDDADTPPGVRIPAGDPVIWEFVITNTGNEELTDIVLTDDQLGDISCPRTTLDASGGAN
DSMTCTVTGTALPGQHDNIATVTAVPPVGPNLITRDPGHYFGTVPGFEIEKTTNGEDADN
APGPEIPVGEQVTWAFVVTNTGDPGENLTDIVVVDDKIGDICTIAFLPARTNLADPFPTA
TCSAFSTALPGQYENTATATATPPSGATITHRDPSHYTGVEPGLSIEKLTNGERAASAPG
PYIPVGDPVTWTYRITNTGNQDLTGVVVTDDRIDATAINCGAGNNVIASLPAGGDPVECT
ATGTAAAGQYANIGTATVTPPQGPPLTPTSTSHYFGPTPGLQLVKKTNGESADTAPGPVV
LLGDAISWTYEVTNTGNMTLTDVAVTDSDPGVSVSCPLNELAPSGEANDSMTCTASGTAT
AGQYANTGTATGTPPTGPALRVPNTSHYFGADPHIRVVKLTNGELIGGPPGNTLRVGDAV
TWTYNVTNTGNVVLTGVGVTDDQGVTVTCPRTTLGVGETMPCTGSGIVTAGQYANQANAT
GTPPVGPPVTGITTSWYTGATPGISLLKLTNGEDAKTAPGPTIPVSDPVTWTYRVTNTGQ
QTLTDVTVTDDTGITVTCPATELAPGISMDCTASGTAVAGQYGNVGTAIGTPPTGSPVKS
PDPSHYFGAVPSIKIEKRTNGEDADTEPGPSIRVGNPVSWLYIVTNDGNVTLTDVGVVDS
DLGAVACNDDLLVPGATTTCTALGTAVAGQYMNEATATGTPPAGLTPPISTDPSHYYGWT
PGIDLRKTTNGIDAATAPGPELAVGSTVVYEYLVTNTGDVPLTDIVVTDDPEGTASCPQT
TLDPGEPMTCEIERTVVAGAYTNTGTVTGQPPTGTPVTSTYTNHHTGGTPPVCDADANGV
IDINDIRAIMLARGRPADPGFDPRDADGDGVITRSDAKVCILDCTYPNCATAP
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgactaatctcgtgaaacactcgaagctttcctcgtgcctgcgccatgcggttgcacgc
gtcgctctgccggtgctgctcctgctgtcgctcgcgggcatgcaaccggcagcggccttc
atcccggtgcagacttactatgtgccgctgcccgaggacgagctgctgagctcgttccgc
gacatgaccacgcgttgcagcgcctgtaccacgccgcgcagccccatccgcacgctgatc
tccatcgtcgtctccgccgacggcacccagatcctctacgaccagcacgaggacggctac
gagcgcgacccgagcaacccggccggcctgaagcccggcggcaccaccgagatctggggc
gacggcgatctcagcaacggcgtcgcgccgggctacccgagcgacctgctcaatgccggc
gacgtcatctcgctggacaacgacgtgtccgtgccgagcagtgccatcttcttcgacggc
gccgacaagatcgtcgccagcttcccggtggtgatgacccgcgccgccatccccaccggc
cccggcgcgctgcaggcgggcgccatggaggcgctgccgatcgagcgctgggggacgtcc
tatgtggcacccgtgggcgtcaacacccgcgacagcaacagcatgttccagtacaacgcg
ctctatgtcatggcgcgcacggacaacaccgtctgcgccatcgacccggacccggcccgc
accggcgagcccggcgagggcacccagaccctcaatgagggcaagaccctggtggtcgag
aacgtccatgacggcggcaccgtcgactgcgacaagaacgtccacgtggaccagatcacc
ggcgacatcggcgtcaactacgagacgcgctggttctcgctgacgccgacctcgcgcctc
gccaacgactactacggccctgtcggcaatccgcgcgacaagggcgagaccttcgtctac
gtccacaaccccaccggctcgtccatgacggtgcagtgccagaccgacgccggctcctgc
ggcagccgcaccctgagccccggcgagacctggcgcaccagccgcatcccggacggctcc
ggcgtgcgcgtcttcagcaacaatgccggcgaccggttcgcggcgctgtcggtcatcgac
tatggcggccagatctacgactggggctacaccctggagccgcgcaaggagctgtccacc
caggcgctcgtggggctcggcctgggctgcaccaactccaatagctgtgaccgcagccgc
agcgtcatctgggtcacgcccaccgcggacacgaccatctacgtcaaccgcgatggcgcg
ccggccagttgccccggcggcggcggcgccgatgagagccatttcgtgcgtgcgctggag
gcggtactgctgacggaccccagcgacaacgacatgaccggcgcgcgcatctatacctgc
gacgagaacgcgcccttcgtcgccgcctggggccaggatccggagcgctccagatccggg
gacaacgagggcctggacatgggcaccctggtgccgccgctacccagggtctccgccacc
aagttcgcggcgctcttcatcgacgccgacggcgacggcgactttagcccgggcgatacc
atccgctactccatccgcgtgtccaacaactcgcagttcgagctgccggtggatgcgatc
aacgtccaggacagcctgcccacggcggcgagctacgtccccggatcgaccacctatcag
gccgacgacagcaccgcgaccatcccggtggcggacgacaccagcggcacggccttcccg
ctggacgacgccggcaagaacaacctggccgtgatcccgggcaatcaggcggccacattt
gccttcgacgtgctgatcgacgtcacccgcggcgactgcgacgacgacttcgtgaacacc
ggcgaggtgcgcttcccggtcgactccaccgacccgatcccgctggaggaccgccgccgg
ctcacctgctccccggccatcgacctcgagaagtccaccaacggtgatgacgcggactca
cccaccggtccggtgctggccgtcggcgcgcaagtcgattgggagtacgttgtcaccaac
atcggcaacaccccgctcgacagcatccagttgttcgacgacaagctggtcaccgtcggc
tgcccgcagcccacgctggcgccgggcgcgtccatgacctgcaccgagaccggtacggcc
caggccggccagtactccaacaccggttacgtcaccgccaaccacgagggcaccacggtc
aaggaccacgacccgagccactacttcggcggcaacgcgagcatcgacatcgagaagtcc
accaacggcgaggatgccgatacgcagaccgggcccgtcgtcgaggtgggcagtcccgtc
acctggaactacgtcatccacaacaccggcgacctggtgctgagcaacgtggtcgtcacc
gacaatcagggcgtgaccgtcacctgcccgccggcggcgtccaccctcgacccgggcgag
aagcaggtctgcaccgcgaccggcaccgccgcccccgggcagtacgccaacatcggcacc
gtcaccggcacgccgcccatcggcgccaatgtcaccgacaccgacccgagccactacctc
ggcgtgaccccgagcgtctccatcgaaaaggccaccaacaccgaggacgcggacaccgcg
cccggaccgcgcatcgccgtcggcggccaggtgagctggacctacgaggtcgagaacacc
ggcgagacgctgctggcccaggtcggcgtggtggactcggaccccggcgtcacggtgaac
tgcccgctgcagtcgctgacccccggccagagcatgacctgcaccgccaccggcaccgcc
accgccgggcagtacagcaacaccggcacggtcatcggcgccacgccacgcggcacggtg
gtcaaggacacggaccccagccactacttcggcgcccagcccggcctgaccctgcagaag
tccaccaacggccaggacgcggacaccgcccccggcccgagcatcgaggtcggcgacccg
gtgacctggacctatctcgtcaccaacaccggcaacgagcccctgaccggcatctccgtc
accgatgacccgatgcccaccggcggcatcacctgcgacagcaccacgctggcgcccggc
gagtcgaccaactgccacgccagcggcatcgccgttgccggcctgttcgccaacaccgcc
accgcgaccggcgcgccgccgtccgggcccaacgtcacctcgccgccggaccccagccac
tacaccggcgtcggcggcagcatcagcatcgagaaggccaccaacggcgacgacgcggac
agccccaccgggccgcgcatcgccgtcggcggcgccgtcaattggacctatgtcgtcacc
aacaccggcagcgtcgacctgaccgacgtcaccgtcaccgatgaccagggcgtcaccgtg
acctgcccgcagacgacgctcgcggtcggcgagcccatgacctgcgccgcgagcggcacc
gccgtcgccggccagtacgccaacctcggcaccgtcaccgcgctgacgccgaacggcagc
cgggtcaccgacaccgatccgagccactacttcggcggccgtccgagcatcgacctggag
aaggccaccaacggcttcgatgccgacaccggcaccgggccggccatcccagtcggcgat
tcggtaaactggacctacctggtcaccaacaatggcaacgagccgctgaactcggtcagc
ctgatcgataacccagcgcagaccatcacctgtccccggacggccctcgacgtcggcgag
tccatgacctgcaccgccagcggcaccgccatcgccggccagtacgagaacgaggccacg
gccaccggcacgcccccgagcggccccgacgtcgtgcatcgcgacccgagccactacttc
ggcggcgatcccggcatcgacatcgagaagctcaccaaccagcacgacgccgacaacgcg
ccggggccgatcatccccgaaggcgcctccgtgacctggacctatcgggtgcggaacatc
ggcaaccagcagctgaccgacgtgaccgtcgaggacgaccaactggttgacgacaccgtc
atcaactgcggtgagggcacggacaacgtcatcagcgatctcgcccccagcgaggtggtc
ctctgcacggcgagcgatgtcgccatcgccggacagtacgccaacgaggccaccgtcacc
ggcaccacgccgggcttcggcacggtgaccgaccgcgacccgagccactacttcggtgcc
catccggggctgagcctagagaagcgcgtgaacgatctggacgcagacgtcgcgccgggg
ccggaggtgctggtgggtgacaccgtcaccttcaccttccgcgtcgagaacaccggcaac
gaggacctgaccgccgtgaccgtcgtcgacgaccagcttgggaccatcgcctgtccgcag
gatacgcttgatgtcggcgagcggatgatctgcacggtcgaggccatcgcgaccctcggc
cagcacgagaacacggctaccgccaccggcaccccgccgaacggcacgccgctgactccc
gtaccggacaagggccattacttcggcgcgcatccgggcatcatgctggagaagcgcatc
aacggcgacgatgcggacacaccgcccggcgtgcgcatcccggccggcgaccccgtcatc
tgggagttcgtcatcaccaacaccggcaacgaggagctgaccgacatcgtgctcacggac
gaccagctcggcgacatcagttgcccgcgcaccacgctggatgccagcggcggcgccaac
gacagcatgacctgcaccgtcaccggcaccgcgctgccgggccagcacgacaacatcgcc
acggtcacggccgtgccgccggtgggtccgaacctgatcacccgcgatccgggccactac
ttcggcaccgtgccgggcttcgagatcgagaagaccaccaacggcgaggacgcggacaac
gcgcccgggcctgagatcccggtgggagagcaggtgacctgggcgttcgtcgtcaccaac
accggcgacccgggtgagaacctcaccgacatcgtcgtcgtcgacgacaagatcggcgac
atctgcaccatcgcgttcctgccggcccgcacgaacctggccgatccgttcccgacggcc
acctgcagcgccttcagcacggcgctgcccggccagtatgagaacacggccacggccacg
gccacgccgccgagcggggcgacgatcacccatcgtgatccgagccactacaccggcgtc
gagcctgggctcagcatcgagaagctcaccaacggcgagcgtgccgcaagcgcacccggc
ccgtatatcccggtgggcgacccggtgacctggacctatcgcatcaccaacaccggcaat
caggacctgaccggcgtcgtcgtgaccgatgaccggatcgatgccaccgccatcaattgc
ggcgccggcaacaacgtcatcgcctcgctgccggccggcggcgacccggtggagtgcacc
gccaccggcaccgccgccgccggtcagtacgccaacatcggcacggccacggtgacacca
ccgcagggaccgccgctgacgccgacctccaccagccactacttcggcccgacgccgggg
ctccagctggtgaagaagaccaacggcgagtccgccgacaccgcgcccggcccggtggtg
ctgctgggtgacgccatcagctggacctacgaggtcaccaacaccggcaacatgaccctg
accgatgtcgccgtcaccgacagcgatccgggcgtcagcgtcagctgcccgctgaacgag
ctcgcgcccagcggcgaggccaacgacagcatgacctgcaccgcgtccggcacggccacc
gccggccagtacgccaacaccggcaccgccacgggcacgccgcccaccgggccggccctg
cgggtgcccaacaccagccactacttcggcgccgatccgcacatccgcgtcgtcaagctg
accaacggcgagctgatcggcggcccgccgggcaacaccctgcgcgtcggcgatgccgtc
acctggacctacaacgtcaccaacaccggtaatgtggtcctgaccggcgtcggcgtgacg
gacgaccagggcgtgaccgtgacctgcccgcggaccacgctcggggtgggcgagaccatg
ccctgcaccggctccggcatcgtcaccgccggtcaatacgccaaccaggccaacgccacc
ggcacgccgccggtggggccgccggtcacgggcatcaccaccagttggtacaccggcgcc
acgccgggcatcagcctgctcaagctcaccaacggcgaggacgccaagaccgcgcccggg
ccgaccatcccggtgagcgacccggtgacctggacctatcgggtcaccaacaccggccag
cagaccctgaccgatgtcaccgtcaccgacgacaccggcatcaccgtgacctgcccggcc
accgagctggcgcccggcatcagcatggactgcaccgctagcggaaccgcggtcgccggc
cagtacggcaacgtcggcacggccatcggcaccccgcccacgggctcgccggtgaagtcg
ccggacccgagccactacttcggcgccgtgccgtcgatcaagatcgagaagcgcaccaac
ggcgaggacgccgacacggagcccggaccctcgatccgcgtcggcaacccggtgtcgtgg
ctctacatcgtcaccaacgacggcaatgtcacgctcaccgacgtgggcgtggtggacagc
gacctaggcgccgtcgcctgcaacgatgacctgctggtgcccggcgccaccaccacctgc
accgcgctcggcaccgcggtggccggccagtacatgaatgaggccaccgccaccggcacg
ccgccggcgggcctgacgccgccgatctcgacggacccgagccactactacggctggacg
cccggcatcgatctgcgcaagaccaccaacggcatcgacgccgccaccgcgcccgggccg
gagcttgctgtcggcagcaccgtggtctacgagtatctggtcaccaacaccggcgacgtg
ccgctgacggacatcgtcgtcaccgatgatccggaaggcaccgccagctgcccgcagacc
acgctggacccgggcgagccgatgacctgcgagatcgaacgcaccgtcgtcgcgggcgcc
tacaccaacaccggcaccgtcacgggccagccgcccaccggcacgccggtgaccagcacc
tacaccaaccaccacacgggtggcacaccgccggtctgcgatgcggacgccaacggtgtc
atcgacatcaacgacatccgcgcgatcatgcttgcccgcggccgcccggcggacccgggc
ttcgatccgcgcgacgcggacggcgacggcgtcatcacgcgcagcgacgccaaggtctgc
atcctcgactgcacctatccgaactgcgccaccgcaccctga
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integrated database retrieval system