Thiohalocapsa sp. PB-PSB1: N838_12350
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Entry
N838_12350 CDS
T07019
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
thip
Thiohalocapsa sp. PB-PSB1
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Gene cluster
GFIT
Motif
Pfam:
LysM
Phage_tail_X
DUF3566
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
QQO54023
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Position
2893190..2893876
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AA seq
228 aa
AA seq
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MQIVRVSVKVAAVLGIAALVVLLVAATLLYALQKTLTGDVQDVSRHAAGESPSNSVDFNA
AARHEGTTRTASEIAEPTTSNAVSESSVAAPEASFSQSEPVVSTANAPAQSPSEIERGER
SQADNKPPLAAGSRPPPTQESTAAASSSSEAAPESSESTQPASATPGIRYYTVESGDTLY
KIARRFYGAGKYWEAVYNANRSLINDARELKLGWKLELPPRESVVKEN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagtgcgagttagcgtgaaagtggcggcggtcttgggcatcgctgctctggtt
gtccttcttgttgcggcgacactgctttacgctttacaaaagacccttacaggcgacgtt
caggatgtttctcgtcatgccgctggagaaagcccctcgaactccgtggattttaacgcg
gcagcaaggcacgagggtacaacacgaacagcatctgaaatcgcagaaccgacaacgtcg
aatgcagtctctgaatcttccgttgcggcacctgaagcttcgttttcgcaatccgagccc
gtggtctcaacggccaatgctccagcacagtcgccctctgagattgaacgaggcgaaagg
tcgcaagccgataacaagccgcctcttgccgcagggtcaaggcccccgccaacccaggaa
tcgacggctgctgcaagcagttcttccgaggcggcaccggaaagcagcgagtcaacgcaa
ccggcatcggcaacccccggcattcgatactatacggtcgaaagcggcgacacgttgtac
aaaatcgcccggcgattctacggcgccggcaagtactgggaagcagtctacaatgccaac
aggagtctgattaacgatgcgcgcgagttgaaattaggctggaaactcgagctgccgccg
cgcgagagcgtggtaaaggaaaactga
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