KEGG   Thiohalocapsa sp. PB-PSB1: N838_13095
Entry
N838_13095        CDS       T07019                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
thip  Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:thip00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:thip02048]
    N838_13095 (cas8c)
Prokaryotic defense system [BR:thip02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    N838_13095 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QQO54138
LinkDB
Position
complement(3042325..3044100)
AA seq 591 aa
MILQRLVEYYERIDTLPKFGWIRRRIDYIFVLEANGQCIAAESLQKVEGKARTTPEMLVP
AIGKQALKHTMSGKDANLLWDNSKFVLGIGKGGAGKLANFRETLSEWLGSLSDTGVQAVT
AFCTDIAEREHAVEELLARFELHEDFSRRDPCIAFRLAPDVEPVFFRPAVRDAYAARLTQ
LSSDNALLGNCLVTGAEGVPIARNETVIKGVRGAQTSGANVVSFNARAFESYGKRQRGGE
NAPISQNASFAYTTALNHLLRTGSEQRVQIGDSSTVFWAERPHELEASFANLFGEPSSDD
PSAGTREIAKIYRAVESGSFTQGDADTRFHVLGLAPSAARISIRFWETAPAMELAVRVHR
HFEDLRIARGPNDPEHPSLTRLLSACALLGRLDNLPPSLGGDVIRAVLADLPYPATLLHA
AVQRCRAEQRVTYTRAAAIKAWLRRAYRLTGKSKNANDREPHPMLDPLNMNPAYRLGRLF
AALEKIQEESSPGINATIRDRFYGAASGTPGTVFPSLLRLKNHHISKLKKGRAIQMERLI
ADILGGLDDFPRHMLMPDQGRFAIGYYHQRQALFAKHTEDNEGPDHTETDQ
NT seq 1776 nt   +upstreamnt  +downstreamnt
gtgattctgcagcggttggtcgaatactacgagcgtatcgatacgctgccaaaattcggc
tggattcggcgtcgcatcgattacatcttcgtgctggaagccaatggtcaatgcatcgca
gcggagtcgcttcaaaaggtagaaggcaaggcaagaaccactcccgagatgctcgtgccc
gcaatcggcaagcaggcgttgaagcatacgatgagcggcaaggatgcaaatttactgtgg
gacaacagcaaattcgtattggggattggtaaaggcggcgctggcaaactcgcaaatttt
cgggagaccttgtccgagtggctgggctcattgagcgacaccggtgttcaagcggttact
gcattttgtacggatatcgcggagcgggagcacgccgtcgaagaattgctcgctcgcttc
gagctccacgaggatttcagcaggcgcgatccatgtatcgcttttcgcctggcgcccgac
gtcgaaccggtctttttccggccggcggtcagggacgcctatgctgcgaggctgactcag
ctctccagtgacaacgcgttgctcggcaactgtctggtaaccggcgccgaaggcgtgcca
atcgcgaggaatgaaaccgtgatcaagggtgttcgtggggcgcagacctccggcgctaac
gttgtctcattcaacgcgcgggccttcgagtcttacggcaaacgccagcgcggcggagag
aacgccccgattagtcagaacgcatcgtttgcatacaccaccgcacttaaccaccttctg
cgaacgggctcagagcaacgggttcagataggcgacagctccacggtattctgggcggag
cggccacacgaattggaggcatccttcgccaaccttttcggcgaaccgtcatcggatgat
ccctcggctgggactcgggaaatcgccaagatctaccgggccgtagaatcaggctccttt
acccaaggcgatgcggacactcggtttcacgtcctcggcctcgcaccgagcgcggcacgc
atcagcatccgtttctgggagaccgccccggcgatggaacttgccgtacgcgtgcaccgg
cacttcgaggatctgcgaatcgctcgcggtcccaacgacccagaacatccgtctctgaca
cgcctgctgagcgcctgcgcgctcttgggcaggctcgacaacctaccgccaagcctcggc
ggtgacgtaatccgcgccgtgctcgctgatctgccttatccggccacgctgctgcacgcc
gccgtgcagcgttgccgcgcggaacagcgtgtgacgtacacccgcgcggctgccatcaaa
gcctggctccgccgagcgtatcggctgaccggaaagtccaagaacgccaacgacagggag
cctcaccctatgctcgaccccttgaacatgaatcccgcctaccgtctcggccgcctgttc
gcggccttggagaaaattcaggaggaatccagccccgggattaacgcaaccatcagagac
cgcttctacggtgccgcatcaggcaccccaggtacggtctttccgagcttgctgcggctc
aagaatcaccacatcagcaagctcaaaaagggccgcgctatccagatggagcggcttatc
gcagacatcctcggtggcttagacgacttcccgcgacatatgctgatgccggaccaaggc
cggttcgccatcggctactatcaccagcgccaggccctgtttgcaaagcataccgaagac
aacgaagggccagatcacacggagaccgaccaatga

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