Thiohalocapsa sp. PB-PSB1: N838_13320
Help
Entry
N838_13320 CDS
T07019
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00541
Biosynthesis of various nucleotide sugars
thip01100
Metabolic pathways
thip01250
Biosynthesis of nucleotide sugars
Module
thip_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
N838_13320 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
thip01005
]
N838_13320 (kdsB)
Enzymes [BR:
thip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
N838_13320 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
thip01005
]
Lipid A
N838_13320 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
ADH_zinc_N
YaeQ
Motif
Other DBs
NCBI-ProteinID:
QQO54178
LinkDB
All DBs
Position
3094565..3095326
Genome browser
AA seq
253 aa
AA seq
DB search
MNSSFRVVIPARYGATRLPGKPLMEVAGVPLICRVWQLAQASSAAEVVVATDDRRIADVC
REHGADVVMTLAQHPSGSDRIAEVIGQRGWDADDIIVNLQGDEPCMPPSLIDQVAYDLAA
FDDLGMATLAFPIQQRAQLFDPHLVKVVTDAQGFALYFSRAPLPWHRDGFMHKPEHLPVD
TPFLRHIGLYAYRAGFLARYLAWPPAPLECAESLEQLRVLWYGERIHVSIAAEEPGPGVD
TLEDLRLVMERLA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagctcgtttcgggtcgtcatccccgcgcgctatggcgcaacccggctgccgggc
aagccgctgatggaagttgccggggtgccgctgatctgccgggtttggcagcttgcgcag
gccagcagcgccgccgaagtggtggtggcgaccgacgatcggcgcattgccgacgtgtgt
cgcgagcacggggcagatgtggtcatgaccctggcgcagcatcccagcggctccgaccgc
atcgcggaagtgatcggacaacgcggctgggatgccgatgacatcatcgtcaacctgcaa
ggcgacgagccctgcatgccgccatcgctgatcgatcaggtggcgtatgacctcgcggcc
ttcgacgacctgggcatggcgacgctggcgtttccaatccagcagcgcgcgcagttgttc
gacccgcatttggtcaaggtcgtgaccgatgcccagggctttgcattgtacttctcgcgc
gctccattgccctggcatcgcgatggttttatgcacaaacccgagcatctacccgtcgac
acgccttttttacggcacatcggcctgtatgcttatcgagctggcttcctcgcccgctat
ctggcctggccaccggcaccattggaatgcgccgaatccctggagcaactgcgtgtgctc
tggtacggcgaacgcatccatgtctcgatcgccgccgaggagcccggcccgggcgtcgat
acgttagaggatctgcgcctggtgatggagcggcttgcctga
DBGET
integrated database retrieval system
