Thiohalocapsa sp. PB-PSB1: N838_15615
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Entry
N838_15615 CDS
T07019
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thip03032
]
N838_15615
03036 Chromosome and associated proteins [BR:
thip03036
]
N838_15615
03400 DNA repair and recombination proteins [BR:
thip03400
]
N838_15615
DNA replication proteins [BR:
thip03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
N838_15615
Chromosome and associated proteins [BR:
thip03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
N838_15615
DNA repair and recombination proteins [BR:
thip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
N838_15615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QQO54557
LinkDB
All DBs
Position
3640129..3640401
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSDLIDAMAEAAEIPKTAAARALDAFTESIAVALKGGDTVSIIGFGTFSVKERAPRTG
RNPQTGEAIEIGASKTPSFKAGKALKDGIQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtcggatctaatcgatgccatggcagaagctgctgaaataccaaaaactgca
gcagctcgggctttagatgctttcacggagtcgattgctgttgctctaaagggtggtgat
accgtatccattattggtttcggaacattctccgtcaaagagcgcgctcctcgtaccggg
cgcaatccgcagacaggggaagcaatcgagattggggcatccaaaactccgtctttcaag
gctggcaaagcgctgaaagacggtatacaataa
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