KEGG   Thiohalocapsa sp. PB-PSB1: N838_16645
Entry
N838_16645        CDS       T07019                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
thip  Thiohalocapsa sp. PB-PSB1
Pathway
thip03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:thip00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    N838_16645 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:thip02044]
    N838_16645 (tssH)
Secretion system [BR:thip02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   N838_16645 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 Clp_N AAA_22 NBD_SMAX1 nSTAND3 AAA_25 AAA_7 Zeta_toxin AAA_14 ATPase_2 Sigma54_activat NACHT T2SSE RuvB_N DUF815 Filament
Other DBs
NCBI-ProteinID: QQO54722
LinkDB
Position
complement(3901033..3903852)
AA seq 939 aa
MTEISRSALFGKLNPLAYKAIEGATLFCKMRGNPYVELVHWLHQILQNQDTDLHRIMQRF
DLDAARLAKDLTDALERLPRGSRSIADLSSDVEEAVERGWVYGTLMFGETQVRTGHLMVG
ILKTRGLRSVLLAISRQFDKIGVERLSEEFAELLDASPEAGMTANDGFRMDAGAASGDTA
DAIAPAQMGKQDALKQFSIDLTERARNGELDPIVGRDQEIRQIVDILMRRRQNNPILTGE
AGVGKTAVVEGFALRIAAGEVPPPLADVTLRVLDIGLLQAGASMKGEFEHRLRQVIDEVQ
TSPEPIILFIDEAHTLIGAGGTAGTGDAANLLKPALARGTLRTLAATTWSEYKKYIEKDP
ALTRRFQVIQIHEPSEDKAILMLRGIASTLEQHHRVQLLDEALESAVRLSHRYIPARQLP
DKAVSLLDTACARVAISQTTVPGEIEDCRRRIQAVQTELDIIANETAVGVGTHERETSAR
EQLATQQQRLAELESRWDEERRLVEAILSLRARLRGQTAPVEGTGSALEATAQTQIHATP
ALAPKPAPEIQTEPSADLETAATPVLSDNERAQALQQLRELQTELHALQGEHPFILPSVD
AQAVASVVADWTGIPVGRMVKNEVQAVLDLAETLNKRVIGQRHALDRIARRIQTSRARLD
NPDKPIGVFLLAGPSGVGKTETGLALAEALYGGEQNIITINMSEFQEAHSVATLKGSPPG
YIGYGEGGLLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGWMEDAEGRRIDFRNT
LILLTSNVGTDLIMGLCQDPDLMPEPEGIATALREPLLKTFPAALLGRLVTIPYYPLDDQ
MLAAIIRLQLKRIVQRIHDNHQIPLTFSDQVVTLIAARCAEVESGARVVDAILTNTVLPE
ISRELLICTMEGRTVAGIRIDVGEDGFVFDFDPQVNPPG
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgaccgagatcagtcgcagcgcgctgttcggcaagctcaacccgcttgcctacaaggcc
atcgaaggcgccaccctgttctgtaagatgcgcggcaatccctatgtggaactggtgcac
tggctgcatcaaattctgcaaaaccaggacacggacctgcatcgaatcatgcaaagattc
gatttggacgcggcccggcttgccaaggatctgaccgacgccctggagcgtctgccgcgg
ggttcgcgctccatcgccgatctgtcttcggatgtcgaagaagccgtcgagcgtggctgg
gtctacggcacattgatgttcggcgagacccaggtgcgcaccggacacctgatggtcggc
atcttgaaaacccgtggactgcgtagcgtactgcttgcaatctcgcggcagttcgacaaa
atcggcgtcgagcgcctgagcgaagaatttgccgaactcctcgacgcctcccccgaggcc
ggcatgaccgccaacgatggcttccgcatggatgcaggggccgcttccggtgacacagca
gatgccatcgccccggcgcagatgggcaagcaggacgcattgaaacaattctcgatcgac
ctgaccgaacgcgcacgcaatggcgagctcgaccccatcgtcggccgcgaccaggagatt
cgccagatcgtcgacatcctgatgcgccggcgccagaacaacccgatcctgaccggtgag
gccggcgtcggcaagaccgcggtggtggaaggatttgcattgcgcatcgcggccggcgag
gtgccgccaccgctggcggacgtgaccttgcgtgtcctcgatatcggcctattgcaggca
ggcgcaagcatgaaaggcgagttcgagcatcggctgcgtcaagtcatcgacgaggtacaa
acctcccccgagccgatcatcctgttcatcgacgaggcgcacaccctgatcggcgccggc
ggcaccgccggcaccggcgatgccgccaatctgctgaagcccgcattggctcgtggcacc
ctgcgcacccttgccgccaccacctggagcgaatacaaaaaatacatcgaaaaagaccct
gccctaacccgccgtttccaggtcatccagatccatgagccgagcgaagacaaggccatc
ctgatgctgcgcggcatcgcatccaccctggagcagcatcaccgagtgcaactgctcgat
gaggcattggagtcggcggtacgcctgtcccaccgctatatcccagcccgacagctgccc
gacaaggcggtcagtctgctcgataccgcctgcgcgcgggttgccatcagccaaaccacg
gtgccgggcgagatcgaggattgccggcggcgtatccaggcagtgcagaccgaactcgac
atcatcgccaatgagaccgcggttggcgtcggcacccatgagcgcgagacaagcgctcgc
gaacagcttgcaacccaacagcaacggctcgcggagctggaatcccgctgggatgaagaa
cgtcgcctggtggaggctattttgtcattacgcgcccgactgcgtggccagaccgcaccg
gtcgagggcaccggcagcgcactggaagcaacagcacaaacccagatccatgcaacccca
gctctcgcacccaagccagcccccgagatacaaaccgaaccatccgcggatctggaaacc
gccgcaacacccgtgctatccgacaacgagcgcgcacaggcactgcaacaattacgcgag
ctgcaaaccgaattacatgcattacagggcgaacatccgttcatcctacccagcgtcgat
gctcaggcagtggcctcggtggttgccgactggaccggcattccggtcgggcgcatggtg
aaaaacgaagtccaggcagtgctcgatctggccgagacactgaacaaacgcgtcatcggc
cagcgccatgcactggataggatcgcccgccgcattcagacctcgcgcgcgagattggac
aacccagacaaaccgatcggcgtgtttctgctcgccggcccgtccggcgtcggcaagacc
gaaaccgggctggcactggcggaagctctgtatggcggggagcagaacatcatcaccatc
aacatgagcgagttccaagaagcgcacagcgtcgccaccctgaaaggctcacccccgggc
tacatcggctatggcgaaggcggcctgctcaccgaggcggtacggcgcaagccgtacagc
gttgtcttactggacgaggtggaaaaagcccacccggatgtacacgagatctttttccag
gtgttcgacaagggctggatggaagacgccgagggtcgccggatcgacttccgcaatacc
ctgatcctgctcacaagtaatgttggcacggacctgatcatggggctatgccaggatccg
gatctgatgccggaacccgagggcatcgccacggccctgcgcgaaccattgctgaagacc
tttccagcggcattgctgggtcgcctggtgaccatcccctactatcccctggacgaccag
atgctagcagccatcatccggctgcaattgaagcgcatcgtgcagcgcatccacgacaat
catcagatcccgctgaccttcagcgaccaggtcgtgaccttgatcgccgcgcgctgcgcc
gaggtggaaagcggcgcccgcgtggtcgacgccatcctcaccaataccgtattgccggag
atcagtcgcgaactattgatttgcaccatggaaggacggacagttgccgggatcaggatc
gatgttggtgaggatggatttgttttcgattttgatccacaggtcaatccaccaggatga

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