Thiohalocapsa sp. PB-PSB1: N838_16710
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Entry
N838_16710 CDS
T07019
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N838_16710
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thip01007
]
N838_16710
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thip03016
]
N838_16710
Enzymes [BR:
thip01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
N838_16710
Amino acid related enzymes [BR:
thip01007
]
Aminoacyl-tRNA synthetase
Class I (U)
N838_16710
Transfer RNA biogenesis [BR:
thip03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
N838_16710
Prokaryotic type
N838_16710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
HTH_Cmi2_C
DUF2357
Motif
Other DBs
NCBI-ProteinID:
QQO54735
LinkDB
All DBs
Position
complement(3915520..3918405)
Genome browser
AA seq
961 aa
AA seq
DB search
MLDKNYDPHRIEKQWYQRWEDAGWFAPAGSPHSTDSPPAEGGGTYCIMIPPPNVTGSLHM
GHGFNNALMDALIRYHRMQGDRTLWQPGTDHAGIATQMVVERQLEAEGKNRHDLGREAFI
QRVWQWKAESGGSITRQLRRLGSSLDWQHERFTMDEGLSAAVREVFVRLFEEGLIYRGKR
LVNWDPVLHTAVSDLEVISEEETGHMWDMHYPLSNGTGHMTVSTTRPETMLGDCAVAVNP
EDERYKHLIGELVELPLTGRRIPIIADEYADPEFGTGCVKITPAHDANDHAVWLRHRDEN
QISDQPHAGLINLFTPDAAIRANQPDEGELIPNAYVGLDRYQARKRIISDLQAQGLLADV
RDHKLMVPRGDRSGAVIEPYLTDQWYVKVAPLAAPAIAAVEDGRIRFVPDNWKNTYFDWM
HHIQDWCISRQIWWGHRIPAWYDSEGNIYVGRCEQEVRDQHGLGPDFVLEQDADVLDTWF
SSALWPFSTLGWPPQAGKDNDRLQAFYPGSVLITGFDIIFFWVARMIMMGLKFMDDVPFR
DVYIHGLVRDAQGDKMSKSKGNVLDPIDLIDGIELEPLVQKRTQGMMQPHLAEKIAKQTR
KEFPRGIPAFGTDALRFTFAALATTGRDIKFDLGRIEGYSNFCNKLWNASRYVLLNTAVS
EDQQAEQSDLEVELSAADRWIRSRLHQTIESVRTAMDSYRFDLAAQAIYDFTWNQFCDWY
LELCKPVLTSDSASDAAKRGTRRNLIQTLETLLRLAHPLMPFITEEIWQKVKPLERMAST
SDVPTIMLAPYPIADAAAADEDAIAQIEWVQQFILGVRRIKGEMNIPPGKPLPVLVAKAN
AQDRTWIELARPYLDFLARTESITLLEDESEAPESAMALVGEMQILIPMAGLIDKQAELA
RLDKEIGKLRTDIERIENKLANPNFVGKAPAAVVQKEHNRLAEQGSALANLVAQQTKIAA
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaagaattacgacccacatcgcatcgaaaagcaatggtatcagcgctgggag
gacgctggctggtttgcgcctgccggcagcccgcacagcaccgacagcccgccggccgaa
ggcggcggaacctattgcatcatgatcccgccacccaatgtgaccggcagcctgcatatg
gggcatggcttcaacaatgcgctcatggatgcgctgatccgctatcatcgcatgcagggt
gatcgcaccctgtggcaaccaggcaccgatcatgccggcatcgccacgcagatggtggtt
gagcggcagttagaggcggaaggcaagaaccgccatgatttaggccgcgaggcgttcatt
cagcgcgtctggcagtggaaggccgagtctggcggcagcatcacccggcagctgcgccga
ctgggctcgtcgctggattggcagcatgagcgcttcacaatggacgaaggtctctccgca
gcggtgcgtgaggtcttcgtacggctgttcgaggaaggcctgatttatcgcggcaaacga
ctggtgaactgggatccggtactgcacacggcggtctcggatctggaggtgatttccgag
gaagagaccggccacatgtgggatatgcactatccgctgagcaacggcaccggccacatg
accgtctccaccacccgcccagagaccatgctcggcgactgcgcggtggccgtgaaccca
gaggacgagcgctacaaacacctgatcggcgagttggtggaattgcctttgaccggacgg
cgtattccgattatcgccgatgagtatgccgatcccgaattcggcaccggctgtgtcaag
atcacgcctgcccatgatgccaacgaccacgccgtttggctgcgccaccgcgacgaaaat
cagatcagcgatcagccgcatgccggactgatcaatctctttacgccggatgcggccatt
cgtgccaaccagccggacgagggcgagctgattccgaacgcttatgtgggcctggaccgc
taccaggcacgtaagcggattatttccgatctacaggcacaggggctgctggccgacgtg
cgcgatcacaaattgatggtgcctcggggcgatcgctccggcgcggtcatcgagccctat
ctgaccgatcaatggtatgtcaaagtcgcccccttggcggcacccgcgatcgccgcggtg
gaggatgggcgcatccgcttcgtaccggataactggaagaacacctattttgactggatg
catcatatccaggactggtgcatcagtcgccagatctggtggggccatcgcatcccggcc
tggtacgacagcgaaggcaatatctacgtcggccgctgcgaacaggaagtgcgcgatcag
catggccttggacccgactttgtgctggaacaggatgcggatgttctcgatacctggttc
agctctgcattgtggcctttcagcaccctaggctggcctccgcaagcaggcaaggacaac
gaccggctgcaggctttttatcccggctcggtgctgatcaccggtttcgatatcattttt
ttctgggtcgctcggatgatcatgatggggctcaagttcatggacgacgtaccatttcgc
gatgtctatatccatggtttggtgcgcgatgcccagggcgacaagatgtccaagtccaag
ggaaatgtgctcgatcccatcgatctgatcgatggcatcgagctggagccactggtgcaa
aaacgcacccagggcatgatgcagccgcacttggcagagaagattgccaagcagacccga
aaggagtttccgcgggggatccctgcgttcggcaccgacgctctgcgcttcaccttcgct
gcgttggccaccacgggtcgcgacatcaagttcgatctggggcgtatcgaaggctacagc
aatttttgcaacaagctttggaatgcatcccgctatgtgttgctgaacaccgcagtcagc
gaagaccagcaagcggagcagagcgatctggaagttgaactgagcgcggctgaccgctgg
attcgcagccgtctgcatcaaaccatcgagagcgtgcgcaccgccatggatagctatcgc
ttcgatctggccgcacaggcgatctacgattttacttggaaccaattttgcgattggtac
ctggaattgtgcaagccggtgttgaccagtgacagcgccagcgatgcggccaagcgcggc
acccgccggaatctgatccagacactggaaactctgctgcgcctggcgcacccgctcatg
ccctttatcaccgaggaaatctggcaaaaggtcaaaccgctggagcgcatggcgtccacc
agcgatgtgccgaccatcatgctggcgccctacccgatcgccgacgccgcggcggcggat
gaggatgcgattgcgcagatcgaatgggtacaacagtttattctcggtgtacgccgtatc
aagggcgagatgaacatccctcccggcaagccattgccggtgttggtggccaaggccaat
gcgcaggatcgtacctggatcgaattggcgcggccctatctcgactttctcgcgcgcacc
gaatccatcaccctactcgaggacgagtccgaggccccggaatcggccatggcgctggtc
ggcgagatgcagattctgattccgatggcgggtctgatcgacaaacaggcggaattggcg
cgactggataaggagatcggtaaattacgcaccgacatcgagcgcatcgagaacaaactt
gccaacccgaactttgtcggcaaagccccggccgcggtggtgcagaaagagcacaaccgc
cttgcagaacaaggatccgcattggccaatctggttgcacagcagaccaagatcgcggcg
ctctga
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