Thiohalocapsa sp. PB-PSB1: N838_16810
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Entry
N838_16810 CDS
T07019
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N838_16810 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thip03019
]
N838_16810 (groL)
03110 Chaperones and folding catalysts [BR:
thip03110
]
N838_16810 (groL)
03029 Mitochondrial biogenesis [BR:
thip03029
]
N838_16810 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thip04147
]
N838_16810 (groL)
Enzymes [BR:
thip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
N838_16810 (groL)
Messenger RNA biogenesis [BR:
thip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
N838_16810 (groL)
Chaperones and folding catalysts [BR:
thip03110
]
Heat shock proteins
HSP60 / Chaperonin
N838_16810 (groL)
Mitochondrial biogenesis [BR:
thip03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
N838_16810 (groL)
Exosome [BR:
thip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
N838_16810 (groL)
Exosomal proteins of other body fluids (saliva and urine)
N838_16810 (groL)
Exosomal proteins of breast cancer cells
N838_16810 (groL)
Exosomal proteins of colorectal cancer cells
N838_16810 (groL)
Exosomal proteins of bladder cancer cells
N838_16810 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
QQO54752
LinkDB
All DBs
Position
3936955..3938604
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEVKFSSDARNRLMEGVNVLANAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELADKFENMGAQMVKEVASQTSDIAGDGTTTATVLAQAMVREGLKGVAAGMNPMDLKRGL
DKAVAAAVQELQALSKPCSDNREIAQVGTISANSDDSIGEIIAEAMEKVGKEGVITVEEG
KSLQNELDVVEGMQFDRGYLSPYFINSQQSQTAELEDPYILLHDKKISNIRDLLPVLEAV
AKAGRPLLIVAEDIEGEALATLVVNSIRGIIKVCAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEVGLSLEKATLNELGSAKKVLVSKDETTVIDGAGADGEIKGRCDQIRAQIEETTSDY
DREKLQERLAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI
RALTNIKGLTGSNHDQDVGIAIALRAMEEPLRQIVNNAGDEASVVLHKVADGEGNYGYNA
SNGEYGDLVDMGILDPTKVTRTALQNACSVAGLMITTEAMVAEEPKDEGPAPGGGGMGGM
GGMGDMGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaagtcaaattcagttccgatgcccgtaatcgtctcatggagggcgtg
aatgtcctcgccaatgcggtaaaggtcaccctaggacccaagggtcgcaatgtcgtgctg
gagaaatccttcggcgctccaaccgtcactaaagacggcgtttcggtggcaaaggaaatc
gagcttgccgacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcctcgcaa
acgtcagacatcgccggtgatggcaccaccaccgccaccgtgctggcacaagccatggtg
cgcgagggtctgaaaggcgtcgctgccggcatgaacccaatggatctcaagcgcggcctg
gataaggcggttgctgccgccgtacaggaattgcaggcactctccaagccctgctctgat
aaccgagagatcgctcaggtcggtaccatctcagccaactccgatgattccatcggcgag
atcatcgctgaggcgatggaaaaagtgggcaaggaaggcgtcataacagtggaagagggc
aagtcgctgcagaacgaactcgatgtggtcgagggcatgcagttcgaccgcggctatctg
tcgccatacttcatcaacagccaacaaagccagaccgccgagctggaagatccttacatc
ctgctgcatgataagaagatctccaacatccgcgatctgctgccggtactggaagcagtc
gccaaggccggtcgtccactgctgatcgtcgccgaagacatcgaaggcgaagctctggcc
acgctggtggtcaactccatccgcggtatcatcaaggtctgcgccgtcaaggccccgggc
tttggcgatcggcgtaaggccatgctgcaggatatcgccatcctcaccggcggtacggtg
atcgccgaagaggttggtctgtcgttggaaaaagccacgctgaatgaattaggctcggcc
aagaaagtgctggtcagcaaggacgaaaccacagtcatcgacggcgctggcgccgacggc
gaaatcaagggtcgctgcgatcagatccgcgctcagatcgaagagaccacgtccgactac
gaccgcgagaaactacaggagcgtctggccaagctagccggaggtgttgccctgatcaag
gttggagccgccacggaagtcgaaatgaaggaaaagaaggcgcgcgtcgaagacgcgcta
cacgccactcgtgccgcagtggaagagggtatcgtacccggcggcggtgtcgcattgatt
cgcgcattgaccaacatcaaggggctgaccggcagcaaccatgaccaggacgtgggtatt
gccatcgccctgcgcgcgatggaagagccgctgcgccagattgtcaacaatgcgggcgac
gaagcctccgtggtattgcacaaggtggccgacggcgaaggaaactacggctacaatgcc
tccaacggcgagtacggcgacctggtcgatatgggtatcctagatccgaccaaagtcacc
cgcacggcgctgcaaaatgcctgctcggtggcaggtctgatgatcaccaccgaggccatg
gtggcagaagagcccaaggatgaagggccggcacctggcggtggcggcatgggcggcatg
ggcggtatgggcgatatgggcatgatgtaa
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