Thiohalocapsa sp. PB-PSB1: N838_17065
Help
Entry
N838_17065 CDS
T07019
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
N838_17065
Enzymes [BR:
thip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
N838_17065
Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
N838_17065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
FHA
Yop-YscD_cpl
DUF6377
Motif
Other DBs
NCBI-ProteinID:
QQO54796
LinkDB
All DBs
Position
complement(4008744..4010276)
Genome browser
AA seq
510 aa
AA seq
DB search
MSEDASNLGSELGQREPALRPIRVELVDASGSKQTHSVDKALLIGRGADVGIKIPHSLVS
RQHLALYPEAGRWWIRDLQSSNGTWVAGQRIDTVPVAGTTRVQLGLDGPVIQLTPATPPP
AKRRSRSIQDVSRHYFDQDAPDAAGEHTMMIRRAYKDMKRRQRHFYGLILAGLMVLLTIM
GGIVLFQYTQLEKTKQLAKETFYEMKELELHIADLEAGIQRDASAALRARIAESKRVLAG
MRERYDSFVQEVQKSRLVPLNSEDQIILHIARVFGETELDLPDDFVAEVKKYIRKWQATP
RLERAIRRLHENGYAPIIYRELTAQDLPPQFLYLALQESSFRYDAVGPPTRYGHAKGMWQ
FIPDTAKRYGLTPGPLQNFGRYDADDDRHNVAKATNAAARYLKYIYRTDAQASGLLVMAS
YNWGEGNIIKRLRKMPKNPRERNFWKLLREHRIPNETYNYVFYIFSAAVICENPRLFGFD
FDNPLSGLGLGIRQAAFPADPSRMAELSVY
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatgcttccaacctgggctcggaactcggccagcgcgaacccgcgcttcgg
cccatacgagtcgaactggtggatgcttccggcagcaagcagacgcatagcgtcgataag
gcgctgttgattgggcgcggggcagatgtggggatcaagatcccgcactccctggtcagt
cgtcagcacctagcattgtatccggaagccgggcgctggtggattcgggatctccagagc
agcaatggtacctgggtcgccgggcagcgcatcgacacagtccccgtggccggcacgacc
cgagtacagctcggccttgatgggccggtgatccaactgacgcccgcgacgcctcctccc
gccaagcggcgctcccgatccatacaggacgtatcccggcattatttcgaccaggatgcc
ccggatgctgctggcgaacacaccatgatgattcgacgggcctataaggatatgaagcgg
cggcaacggcatttctacggcctgatcttggcgggcttgatggtgctgctgacgatcatg
ggcggcattgtgctgtttcagtacactcagctggaaaaaaccaagcagcttgccaaggag
actttctatgagatgaaggaactcgaattgcatatcgccgacctggaggcgggcattcag
cgcgatgcatccgcggcgctccgggctcggatcgccgagtcgaagcgcgtgttggccggc
atgcgcgagcgctacgacagctttgtccaggaagtgcaaaagagtcggctggtacctttg
aattcggaagaccagatcattttgcacatcgcgcgggtatttggcgagaccgagctggat
ttgccggacgattttgtcgcagaagtaaaaaaatacattcgcaaatggcaggcgaccccg
cgcctggagcgcgctatccgacggctgcacgaaaacggctatgcgccgatcatctaccgc
gaactcaccgcgcaggatctgccgccgcaatttctttatctcgcgttgcaggaatccagc
tttcgctatgacgcggttggtccgcccacacgctatgggcacgccaagggtatgtggcaa
ttcattccggacaccgccaagcgctatggactgaccccggggccattgcagaacttcggt
cgttatgatgcagacgacgatcgccacaatgtggccaaggcgaccaacgccgccgcgcgt
tatctgaagtacatctacaggaccgatgcgcaggcatccggattgctagtgatggcctcg
tacaactggggggagggcaatatcatcaagcgtttgcgcaagatgcccaagaacccgcgc
gagcgtaatttttggaaactgctgcgtgagcacaggattccgaacgagacctacaattat
gtcttttatatcttctccgctgcggtcatctgcgagaatccgcgtttgtttggattcgat
ttcgacaatccgctgagtggtcttggccttggcattcgccaggcggcatttcctgccgat
ccctcccgtatggccgagctgagcgtctattag
DBGET
integrated database retrieval system
