Thiohalocapsa sp. PB-PSB1: N838_17635
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Entry
N838_17635 CDS
T07019
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thip03016
]
N838_17635 (truA)
Enzymes [BR:
thip01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
N838_17635 (truA)
Transfer RNA biogenesis [BR:
thip03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N838_17635 (truA)
Prokaryotic type
N838_17635 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QQO57941
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All DBs
Position
complement(4143101..4143874)
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AA seq
257 aa
AA seq
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MAVEYDGSGYSGWQYQKHARSVQECLEQAVAVVADHPIRVHCAGRTDSGVHALGQVVHFD
TPVHRRERSWILGTNANLPESIAVRWAMRVQPDFHARFSATGRHYRYLILCQPTRSALWV
NRAVWTHRRLDVIPMREAARALVGCHDFTSFRALACQAKSPVRTIRYLQIERRGLLIELR
VGADGFLHHMVRNLAGVLMAIGRGDAEVDWTRTLLDQRNRALGGVTAPPQGLYLARIDYP
KQFGLPLEDDASHLFMF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggaatatgacggcagcggctacagcggctggcagtatcagaagcatgcccgt
tccgttcaggagtgcctcgagcaggcggtcgccgtggttgccgatcatcctatccgcgtg
cattgtgctgggcgtaccgacagcggcgtgcacgcattgggacaagtagtacatttcgac
acccctgttcacaggcgtgaacgctcctggatactcggtaccaatgccaacctgcccgaa
agtattgcagtgcgctgggcaatgcgggtacagccggactttcatgcgcgcttcagcgcc
accggtcgccattaccgctatctgattctgtgtcagccgacccgctcggccctttgggtg
aatcgcgctgtgtggacacatcggcggctggatgtgataccgatgcgcgaagcggcacgc
gctctggttggttgccatgacttcaccagctttcgggcgctcgcctgccaagcaaagagc
ccggtgcgtactattcgatacctgcagatcgaacgccgtggtttgttgatcgaactccgg
gttggcgcggatggattcctgcatcatatggtccgcaatctggccggagtgctgatggcc
atcggccgcggtgatgcggaggttgactggacgcggacattactcgatcagcgtaatcga
gcgcttggtggggtgacggcgccgccccagggtctttatcttgcgcgaattgactatccg
aagcagttcggattgccactggaggacgacgcgagtcacctgtttatgttttaa
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