Thiohalocapsa sp. PB-PSB1: N838_18450
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Entry
N838_18450 CDS
T07019
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N838_18450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
thip02022
]
N838_18450
02035 Bacterial motility proteins [BR:
thip02035
]
N838_18450
Two-component system [BR:
thip02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
N838_18450
Bacterial motility proteins [BR:
thip02035
]
Pilus system
Twitching motility proteins
N838_18450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_30
Mg_chelatase
HTH_28
AAA_7
PG_1098_Fer
Motif
Other DBs
NCBI-ProteinID:
QQO55035
LinkDB
All DBs
Position
4352799..4354184
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AA seq
461 aa
AA seq
DB search
MSNPKALIVDDEADILELLTITCTRMGIATRGAGTLADALGLIDRESFDLCITDMRLPDG
DGIDLVRTICDRFPKLPVAIITAHGNVDSAVAAMKAGAFDFVSKPLDLEILRNLINAALR
LQQAEQPPADTAGTSGLLGNSPQMQEIRALISKLARNQAPVFISGESGTGKELAARLIHD
QGPRSANTFVPVNCGAIPGELVESELFGHRKGSFTGAVSDKKGLFQTAHGGTLFLDEIVD
LPLSMQVKLLRAIQQKSVRPVGAQQETAVDVRIISASHRDLKEAVETGAFRHDLFYRINV
IDLHLPPLRERPGDIDILARHILKRIAKSSDEDCKQLSDEALEALASYPFEGNVRELENI
LERATALADQKLLQPDDLRLKQFNTSPERRPADTDLVSEPNAPTAGISLINQPLETHLGE
IEKQAILDALNSTHWNRTAAAKLLGMTPRSLRYRLSKLGLD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacccaaaagcgctgattgtcgacgacgaggcagatatactcgaactgctcacc
attacatgcacgcgcatgggcatcgccacccgcggtgccggcacattagccgatgccctg
ggtctgatcgatcgggaatcattcgacctctgtatcacggacatgcgtttgccggacggc
gatggcattgatctggtgcgaaccatctgcgatcgttttcccaaattgccggtagcgatc
atcaccgcacatggcaatgtggattccgcagttgcggcgatgaaggcaggcgccttcgat
ttcgtttctaaaccgctggacctggaaatcctgcgcaacctgatcaatgccgccttgcgc
ctgcaacaagcagagcaacctccggcggataccgcaggcacctcgggcctgcttggcaat
tcgccacagatgcaggagatccgcgccctcatcagtaaacttgcccgcaatcaggcaccg
gtattcatcagcggcgaaagcgggacgggcaaagaattggccgcgcgcctgattcacgat
caaggaccgagatccgcaaacaccttcgtgccagtcaactgcggcgcaatccccggcgag
ttggtggagagtgaattgttcggccatcgcaagggcagcttcaccggcgccgtaagcgac
aaaaaggggctgtttcagacagcccatggcggcacattgtttttggacgaaatcgtcgat
ttgccattgtcgatgcaggtcaagctgctacgtgccatccagcagaagagtgtgcggccg
gtcggcgcgcagcaggaaacagcggttgatgtgcgcatcatcagcgccagccatcgcgac
ctcaaagaagcggtcgaaacgggcgccttccggcatgatctattctatcgcatcaatgtc
atcgatctgcacctgccgccattgcgcgagcgccctggggacatcgatatactggctcgg
catatcctgaaacgcatcgcgaagagcagcgacgaagactgtaaacaactctccgatgag
gcactcgaggctctggccagctatcccttcgagggcaatgtgcgcgaacttgagaatatc
ctggagcgggcaacagccttagccgaccaaaagctgctgcagcctgatgatctacgtctg
aaacagttcaacacaagccccgagcgtcgtccggcagacaccgacctggtcagcgaaccg
aatgcgccgacggctggcatctccctgataaaccaaccgctggagacccatctcggcgag
atcgaaaaacaggccatcctcgacgctctgaacagcacccactggaaccgcaccgccgcg
gccaagttgctcggcatgacgccgcgttcgctgcgctatcggctcagcaagcttggcttg
gattga
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