Thiohalocapsa sp. PB-PSB1: N838_18560
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Entry
N838_18560 CDS
T07019
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N838_18560 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thip01007
]
N838_18560 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thip03016
]
N838_18560 (pheT)
Enzymes [BR:
thip01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
N838_18560 (pheT)
Amino acid related enzymes [BR:
thip01007
]
Aminoacyl-tRNA synthetase
Class II (U)
N838_18560 (pheT)
Transfer RNA biogenesis [BR:
thip03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
N838_18560 (pheT)
Prokaryotic type
N838_18560 (pheT)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
QQO55050
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Position
complement(4376390..4378768)
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AA seq
792 aa
AA seq
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MRFSEAWLREWVNPPIDTATLSAQLSMAGLEVDAVEPAAPPFRDVVVGHVMAVEPHPDAA
KLRLCRVDVGIDEPLQIICGAANVAEGMRVAVAVVGARLPGDFRIKKAKLRGIESFGMIC
SAAELGLADTSDGILVLPSTAPVGKDVRVTMALDDQCIELDLTPDRGDCLSMAGVAREVG
VLNRVPVCVPPMTSVTAVIDDQMTVDLCATAACPRYLCRVVQGIDPAADTPLWMQERLRR
GRLRPIGAVVDITNYVLLELGQPMHAFDLQQIQDGIQVRMAYPGEPLALLNGDRVKLRED
TLVIADAQHAVAMAGIMGGAETAVNEATRDVLLESAFFSPTAISGRARAYGLHTDSSHRF
ERGVDPQLQRIAMERATRLLCDIVGGRPGPVVTAVSDPDLPKPRELVLRRQRIPQVLGIE
LEDEQISDILTRLGMHVEPADGGWRVTPPSSRFDLELEVDLIAELGRIYGYNNIPVTHAR
SAATTRAPLEMAFDLERVRQVLVSRGFHEAITYSFVSPQQQSQIDPDLTPLSLANPLSAE
FSVMRTSLWPGLLQAARQNLSRQQSRVRLFESGLRFRDAGDGLQQQAMLAGLSVGPTLPE
QWGERLRQVDFYDLKADVEAVLAASGCSADCDFIAVSHPALHPGQCARIERHGRELGWIG
TLHPSLSATLEVPPELHLFELDTESLGGSLKPKFVPLSKFPSIRRDIAIVVNAAVAFDSV
RHCVEDAAGELLRDLLLFDVYIGDKIESGRKSMALGLILQADSQTLTDQDVESVMARVVD
RLATDVNAQLRT
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcagtgaagcctggctgcgggaatgggtcaaccctcccatcgatacagcgacc
ctgagcgctcagctcagcatggcaggcctcgaggttgatgctgtcgagcctgctgcgccg
ccattcagagatgtcgtggttggtcatgtgatggccgtggaaccgcacccggatgcggcc
aagctgcgcctgtgtcgggtagatgttgggatcgatgagccattgcagattatctgtggt
gctgccaacgttgccgagggcatgcgggttgcggtggcggttgtcggggctcggctaccc
ggcgacttcagaattaaaaaagccaagctgcgcggtatcgaatcatttggcatgatctgc
tccgcagcagaactcggtctggcggatacctccgatggcattctcgtcttgccaagcact
gcgccggtcggcaaggatgtgcgggttaccatggcccttgatgaccagtgtattgaactc
gacctgacgccggaccgtggcgattgtttgagcatggctggggttgctcgcgaagtcgga
gtgctcaaccgcgtgccggtgtgtgtgcctccaatgacgtcagtgaccgccgttatcgac
gatcagatgacggtagacctatgcgcgactgcagcctgcccgcgttatctatgccgggtg
gtgcagggtatcgatccggctgccgacacgcccttatggatgcaggagcgactgcgtcgt
ggcaggctgcggccgatcggtgcggtggtggatataaccaactatgtcctgctggaattg
ggccagccgatgcatgctttcgatttgcagcagattcaggatggcattcaggtgcgcatg
gcatatcctggagaaccgctggcattgctcaatggcgacagggtcaaactgcgcgaagat
acgctggtgatcgcggatgcgcagcacgccgtagcgatggccggcatcatgggcggggcc
gagacggccgtcaacgaagctacccgtgatgttttgcttgagagtgcattcttttcgccc
accgccatcagcggcagggcgcgcgcgtatggactacacaccgattcatcacatcgtttc
gaacgaggtgttgatccgcaattgcaacgcatcgccatggagcgtgcgaccagactatta
tgtgatatcgttggtgggcggccgggaccggtcgtaaccgcggttagtgatcccgatttg
ccaaagccgagggagctggtgctgcgccggcagcgtattccacaagttctcggtatcgaa
cttgaagacgaacaaatcagtgatatcctgacgcgactcggtatgcatgtcgagccagcc
gatggcggctggcgagtcacgccacccagcagtcgcttcgatctggaattagaagtagat
ctgatcgcggaactcggtcgcatttacggctataacaacatcccggtgacgcatgctcgt
tcggcagcgaccacgcgcgcaccgttggaaatggctttcgatctggagcgagttcgccaa
gtgctggtcagtcgtggttttcatgaggccattacctatagcttcgtcagtccgcagcag
cagtcgcagatcgatcctgacctaacgccattatctcttgccaacccgctctccgccgag
ttctcggtgatgcgaaccagcctttggccaggacttttgcaggccgcgcgccaaaatttg
tcgcgacagcagtcgcgggttcgcttgttcgaaagtggcctgcgtttccgagacgctggc
gatggattgcagcagcaagcgatgttggctggactcagtgttggtccgacgcttccggaa
caatggggagagcggttgcggcaggtcgatttctatgacctcaaagcggatgtggaagcg
gtattagcggccagcggttgtagcgcggactgcgacttcatcgcagtgtcgcatccggct
ttgcatcccggtcaatgtgcgcgaatagaacgtcatgggcgggaattgggctggatcggc
accctgcatccatccttgtcggcaacgctcgaagtgccgccggaattgcatctgttcgaa
ctcgacaccgaaagcttgggcggtagcctcaagccgaagttcgtcccactatccaagttt
ccctccattcgacgtgacatcgccatcgtcgtcaacgccgcggttgcatttgattccgtg
cgccattgtgtcgaggatgccgctggtgaattattgcgcgatcttttgttattcgatgtt
tatatcggagacaagatagagtcagggcgaaaaagcatggctttgggattgattttacag
gctgattctcagacacttacagatcaggatgtagagtcggtcatggcccgggtggtcgac
cgtctagcgaccgatgtcaacgcccagctgcgaacctga
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