Thiohalocapsa sp. PB-PSB1: N838_18895
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Entry
N838_18895 CDS
T07019
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00020
Citrate cycle (TCA cycle)
thip00190
Oxidative phosphorylation
thip00650
Butanoate metabolism
thip00720
Other carbon fixation pathways
thip01100
Metabolic pathways
thip01110
Biosynthesis of secondary metabolites
thip01120
Microbial metabolism in diverse environments
thip01200
Carbon metabolism
Module
thip_M00009
Citrate cycle (TCA cycle, Krebs cycle)
thip_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thip_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N838_18895 (sdhA)
00650 Butanoate metabolism
N838_18895 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
N838_18895 (sdhA)
00720 Other carbon fixation pathways
N838_18895 (sdhA)
Enzymes [BR:
thip01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
N838_18895 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
NAD_binding_8
GIDA
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QQO55101
LinkDB
All DBs
Position
complement(4456036..4457799)
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AA seq
587 aa
AA seq
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MPIPHRKFDALIIGAGGAGLNASLRLASADLRVAVVSKVFPTRSHTVAAQGGVNAALANV
LPDDWHWHMFDTVKGSDYLGDQDAIEYMCREAIPTVYELEHAGVPFSRLDTGKIYQRAFG
GQSQNFGGDQAVRTCAAADRTGHAILHTLYQQNIRARTHFFDEYLAIDLIRDEEGCILGA
LVLAIETGELLVIEAKATLLATGGYGQVFRTTTNAFINTGDGMAMALRVGVPLQDMEFFQ
FHPTGVAGKGMLITEGARGEGGFLVNGDGERFMERYAPRALDLASRDVVARSMVTEIREG
RGCGPQKDHVMLKLDHLGADVVHQRLPGISDICRVFLGIDPAKEAIPVFPTAHYAMGGIP
TDRNARVVAPAKNGPEDVVEGLYAAGECACVSVHGANRLGGNSLLDILVFGRAAGTDILR
YIEENPNHRDMSDSYLEPAMSRLQRWERTGEGTTVHEIKAELRKLMEDHCGVFRDKETMT
IGVEKLKDLRSRVDDVRLKDHSKLFNTARIEALELDNLVDVGMSTLLSALYREESRGAHS
RVDFPTRDDESWMKHSLYILEDDRMDFKPVRTKPLTVETFPPKARVY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcccacacagaaaattcgacgccctgattattggcgccggcggtgccggtctg
aacgcatcactgcgtctggcgagcgccgacctccgcgtagcggtcgtctcaaaagtcttc
ccaacccgttcgcacaccgttgctgctcaaggcggcgtcaacgccgccctcgccaatgta
ctgcccgatgactggcactggcatatgttcgataccgtaaagggatcggattacctcggt
gatcaggacgctatcgagtatatgtgccgcgaagccattccaactgtctacgaactggaa
cacgctggagtgccattttcccggcttgacacgggcaaaatttatcagcgcgcttttggt
ggccaaagtcagaacttcggcggcgatcaagcagtacgaacctgcgccgcagcggaccgt
accggtcatgccattctgcataccctgtatcaacaaaacatccgcgcacggacacatttc
tttgacgaatatctcgccattgatctgatccgtgacgaagaaggctgcattctcggcgcg
ttggtattggccattgaaaccggcgaattgctggtgatcgaggcaaaagccacattgctc
gccaccggcggttatgggcaggtgttccgaaccacgaccaatgcctttatcaataccggc
gatggcatggccatggcgctgcgggttggcgttccgttgcaggatatggaattcttccag
ttccatcccacgggcgttgcaggtaagggcatgctgattaccgagggcgcacgaggcgag
ggtggtttcctggtcaacggcgatggcgagcgctttatggaacgctacgcgccccgagcc
ctggatcttgccagccgcgacgtagtcgcccggtccatggtgaccgaaattcgcgaggga
cgcggctgtggaccgcagaaggaccatgtgatgttgaaactggatcatctaggcgcggat
gtcgtacaccaacgcctgcctggcatcagcgacatctgccgcgtcttcctgggcatcgat
ccggccaaggaagccatcccggtcttccccacggctcattacgccatgggtggcatccca
actgaccgtaacgcgcgggttgtggcacctgccaagaatggtccggaagatgtggtcgaa
ggtctctatgcggcgggcgaatgtgcttgcgtatcggtgcacggtgctaatcgtctaggc
ggtaactcgttgctggatatcctggtcttcggtcgtgccgcgggtaccgatatcctgcgc
tacatcgaggagaatccaaatcatcgcgacatgagcgacagctatctcgaaccggcgatg
tcgcgcctgcagcgctgggagcgcaccggtgaaggcaccacagtgcacgagatcaaggcc
gagttgcgcaagctgatggaagaccattgtggggtattccgcgacaaggagaccatgacc
atcggcgtcgaaaagctcaaggatttacgctcccgtgtcgacgacgttcgtcttaaagac
cacagcaagctgttcaacaccgcccgtatcgaagcgctggaactcgataatctggttgat
gtcggtatgtcaacgctgctctccgcgctgtatcgcgaagaaagccgcggcgcgcattcc
cgtgtcgacttcccgactcgcgacgatgaaagctggatgaagcacagcctgtatattctg
gaagacgatcgcatggacttcaaacccgtgcggaccaagccgctgacggtggagaccttc
ccgcccaaggcgcgggtgtactga
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