KEGG   Thiohalocapsa sp. PB-PSB1: N838_21640
Entry
N838_21640        CDS       T07019                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
thip  Thiohalocapsa sp. PB-PSB1
Pathway
thip00740  Riboflavin metabolism
thip01100  Metabolic pathways
thip01110  Biosynthesis of secondary metabolites
thip01240  Biosynthesis of cofactors
thip02024  Quorum sensing
Module
thip_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:thip00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    N838_21640 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    N838_21640 (ribD)
Enzymes [BR:thip01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     N838_21640 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     N838_21640 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QQO58020
LinkDB
Position
complement(5138186..5139316)
AA seq 376 aa
MARALRIARSGLYTTDPNPRVGCVLVRDNLVVGEGFHRRAGEPHAERNAIDLAGDAARGA
TAFVTLEPCCHHGRTPPCTDALLEAGIARVVVAMEDPNPIVSGRGLRRLRAAGVEVRTGL
MEQMARALNPGFEKRMRGGMPYVRCKLAASLDGRTSMASGESVWITSADARRDVHRLRAR
SSAVVTGIGTVLADNPSMNVRLSSNEFPALWPNERPRQPLRVVVDTHLRMPVEARMLQLP
GATLIATCEDSPRAIARANAAGAEVQVFPAAPSGGVDLHVLLCYLAEREINEVLIEAGPT
LAGAALQAGLVDELLIYQAPHLMGDSARGLFHLPGLDTMQQRIPLKFTDVRQIGIDLRLT
LIPVRDDQPRNRMCEI
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcgcgcgccctgcgtattgcccgtagtgggttatatacgacagaccccaatccccgc
gtcggctgcgtgctagtgcgtgacaacctagtggtaggggagggctttcatcgccgcgcc
ggcgagccccatgccgagcgtaatgccatcgatctggctggagatgcggcgcgtggtgcc
accgcctttgtcacgctggaaccctgctgccatcatggacgcacgccaccctgcaccgat
gccctgctggaagccggcattgcgcgggttgtggtcgcgatggaagacccgaaccccatc
gtcagtggccgcggattgcggcggctgcgggcggctggcgtcgaggttcgaacgggcctg
atggagcagatggctcgcgcattgaaccccggattcgaaaaacgcatgcgcggcggcatg
ccctatgttcgctgcaaacttgccgcaagcctggacgggcgcacctccatggccagcggc
gagagtgtctggatcacctccgcagatgcccggcgtgatgtacaccgcctgcgcgcgcgc
tcatcggcggtggtgaccggcatcggcaccgtgctggccgataatccatccatgaacgtg
cggctcagctccaatgaattcccggctctatggccgaatgagcgaccgcgccagccgttg
cgcgtggtggtggacacacatctgcgtatgcccgtggaggcgcgcatgctgcaattacct
ggtgcaaccctgatcgccacctgcgaagacagcccgcgagccatcgcccgggccaatgcc
gccggtgccgaggttcaggtcttcccggccgcgccgagcggtggtgtggatctgcacgtt
ctcctctgctacctggccgagcgcgagatcaacgaggtactgatcgaggccggtccaacc
ctggcaggtgccgcgctacaggccggcctggtggacgaattactgatttaccaggcgcca
catctgatgggagattccgcccgcggtctattccatctgccgggtctcgataccatgcag
cagcgcattccgcttaaatttaccgatgtacgtcaaatcggcatcgatcttcgtctgacc
ctaatcccagtgcgcgacgatcagccgcgtaatagaatgtgcgagatctga

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